Longicatena caecimuris: L3BBH23_03630
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Entry
L3BBH23_03630 CDS
T07231
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
lcg
Longicatena caecimuris
Brite
KEGG Orthology (KO) [BR:
lcg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lcg03016
]
L3BBH23_03630 (truA)
Enzymes [BR:
lcg01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
L3BBH23_03630 (truA)
Transfer RNA biogenesis [BR:
lcg03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
L3BBH23_03630 (truA)
Prokaryotic type
L3BBH23_03630 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
BCT43918
LinkDB
All DBs
Position
374596..375351
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AA seq
251 aa
AA seq
DB search
MARYKAVVSYDGSSYGGWQKQLNTTSIQEVIEQALAKMHKHDVAIVASGRTDAGVHAIAQ
VFHFDSEMKIQEKHWIKALNSLLPKDIRIQSVKQVTEAFHARFDAIGKRYDYLISNDILN
PFKENYMAKDAHKLDVAYMQECATVLIGTHDFTSFTSNKIDPRKPRVKTITRLEVLQEKD
HVHMIFEGNGFLRYMVRMLSQTLIEAGKHRITKADIKKMLEAKDKHACRYKAVPQGLYLV
RVDYADDEEQN
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atggcacgctataaagcagttgtcagctatgatggcagttcctatggcggctggcagaaa
cagttgaatactacttctatacaagaagttattgaacaagcattagcgaaaatgcacaag
catgatgttgcaatcgtggctagcggacgaacggatgccggtgtacatgctatagctcaa
gtgtttcattttgacagtgagatgaagatacaagagaagcattggataaaagcattgaat
tctctattacctaaagatatccggatacagtccgtaaaacaggttactgaagcgtttcat
gcccgttttgatgccattggaaaacgatatgattatttgattagtaatgatattttaaat
ccttttaaggaaaattatatggcaaaggatgcacataagcttgatgtagcttatatgcag
gaatgcgctactgtattgataggaactcacgattttaccagctttaccagtaataagatt
gatccgcgaaaaccgcgtgtaaaaaccattactcgtttagaggtgttacaggaaaaggat
catgtacatatgattttcgaaggaaacggtttccttcgttacatggtacgcatgttatcc
caaacattaatagaagctggtaaacatcgcattacaaaagctgatataaaaaagatgtta
gaagcgaaagataagcatgcctgtcgttacaaggcagtcccacagggattataccttgtt
cgtgtggattatgcagatgatgaggaacagaattag
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