Longicatena caecimuris: L3BBH23_06820
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Entry
L3BBH23_06820 CDS
T07231
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lcg
Longicatena caecimuris
Pathway
lcg03420
Nucleotide excision repair
lcg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lcg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
L3BBH23_06820 (pcrA)
03430 Mismatch repair
L3BBH23_06820 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lcg03400
]
L3BBH23_06820 (pcrA)
Enzymes [BR:
lcg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
L3BBH23_06820 (pcrA)
DNA repair and recombination proteins [BR:
lcg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
L3BBH23_06820 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
L3BBH23_06820 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
AAA_12
ResIII
PcrA_UvrD_tudor
NPHP3_N
DEAD
Motif
Other DBs
NCBI-ProteinID:
BCT44237
LinkDB
All DBs
Position
721760..724039
Genome browser
AA seq
759 aa
AA seq
DB search
MSFLEHLNKQQVEAVHTVDQHLRIIAGAGSGKTRVVTTRIAYLIEEMQVYPNKILAITFT
NKAAKEMKERVEGMLGEVAKAVQISTIHSFCVRLLREDILEVGYPRNFTILDSDDQKSIL
RDAYKQMQIDVKSYSYNSMLGYISANKTNFVDPVMAKANAGPWAGEQIKADVYAYYEKRL
KEMYGLDFDDLLIFAYRILKDKEEVRAKWQRRFTYIHVDEFQDVDNLQYAIIRLLVGDHS
YLCVVGDPDQTIYTWRGAQVDIIMNFERDFPDSKTVILNQNYRSTQPILNGANALIRNNR
NRIEKDLFTEVEGDNPIIHFTAMDDVNEPVWVASRIMALSHSGVCYRDIAVLYRSNYLSR
GLEKALLDFRIPYRIYGGIRFYDRAEIKDALSYLRLLAPKQEDDEKELYKNLSIKRIINM
PKRGIGAKTMELIEQQAEHDNTNMYEIIKQYEIGKGKAKANIQAFVALIEECRQLVDEIS
IDQLLEKVLEDSGYLDMLREDKEIERLENIKELISDIADYVENNPQGSLQEYLQEISLYT
DKEADSSGDFVQLMTIHAAKGLEFDNVFVYSLCEGIFPNDKSVIEGGQAALEEERRLAYV
AFTRARKQLFLSDSYGYSYVLDKLKTTSRFVKELPEEYLEEVGAKPRNHFASDVDTFTGN
AFLSSQAPQFHEEHQDDMIQTFPNDEETSMGGAKASQNDRKSEMKHKKKGRIRKGDLVNH
SVFGDGVVIKLEGELAAIAFDKRFGIRKINVNHPSLSKK
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgtttttagaacatttaaacaaacagcaggtagaggcggttcatacagtagatcag
catctgcgtatcattgcaggagctggcagtggaaagacgcgtgtcgtgacgaccagaatc
gcgtatctgatagaagagatgcaggtgtatcctaataaaatattagcgatcacttttacg
aataaggcagctaaagaaatgaaggaacgtgtagaaggaatgcttggcgaggtggctaag
gctgtccagatctcaacaattcattccttttgtgtacgtctgttaagagaggatatctta
gaagtaggctatcctcgcaattttacgattttggatagtgatgatcaaaaaagcatttta
cgggatgcttataaacaaatgcagattgatgtgaaaagctacagctataattccatgttg
ggctatatcagtgccaataaaactaattttgtagatcctgtgatggcaaaagcgaatgcc
ggaccatgggcaggagagcagatcaaggctgatgtgtatgcttattatgaaaaacgtctg
aaagagatgtatgggttagactttgatgatttgttaatttttgcttaccgtatcttaaag
gataaagaagaagtacgggcaaaatggcagcgtcgttttacatatatccatgttgatgag
tttcaggatgtggataatttacagtatgctatcatacgtctgttagtaggtgatcacagc
tatttatgtgtggtcggtgatccggatcaaaccatttatacttggcgtggtgcgcaagtg
gatatcatcatgaattttgaacgtgatttccctgacagtaagacggtcattttgaatcag
aattatcgttctacacagccgatattgaacggggcgaatgccttgatccgcaataaccgc
aatcgtattgagaaagacttatttacggaagtggaaggggataatcccatcattcacttt
acggcaatggatgatgtcaatgaaccggtttgggttgccagccgtatcatggctttatcc
cacagcggtgtttgctatcgggatatagcggtattgtatcgttctaactatttatcacgc
ggactggaaaaagcgttgttggattttcgcatcccttatcgtatttatgggggcattcgt
ttctatgatcgtgcagaaatcaaggatgcgttaagctatttacgtttgttggcaccaaaa
caagaggatgatgaaaaggaattgtataaaaacctttccatcaaacgaatcatcaatatg
cccaaacgcggtattggcgcaaaaacgatggagctgattgagcagcaggcggaacacgat
aataccaatatgtatgaaataatcaaacagtatgaaatcggcaaaggcaaggcaaaggct
aatattcaggcatttgtggcgttgattgaagaatgccgtcagctggtggatgaaatcagc
attgatcaactgttggaaaaggtattggaagatagtggctatctggatatgctgcgggaa
gataaagaaatcgagcgattggaaaatatcaaggaattgattagcgatatcgccgactat
gtggaaaataacccgcagggatccttacaagaatatttacaggagatttctttatatacc
gataaagaggcagatagcagtggtgattttgtacagttaatgacgattcatgcggcaaag
ggattggaatttgataatgtctttgtatacagtttgtgtgaaggaatatttccaaatgat
aaaagtgttatcgagggaggtcaagcagctttggaagaagagcgccgattggcctatgtg
gcctttacccgcgcaagaaaacagctgtttttatcagactcttatgggtatagctatgtc
ttagataagctaaagacaacctcacggtttgttaaggaactgccggaagaatacttagaa
gaagttggcgctaagccacgaaatcattttgcgagtgatgttgatacatttaccggaaat
gcctttttatcctctcaagcaccgcagtttcatgaggaacatcaggatgatatgatccaa
acgttccctaatgatgaagaaacgtcgatgggtggggcaaaggcgagtcaaaatgataga
aaaagtgaaatgaaacataagaaaaagggcagaatacgtaaaggagatttggtgaatcac
agtgtctttggtgatggtgtggtcattaaactggaaggtgaacttgcggcaattgccttt
gataagcgatttggcattcgtaagatcaatgtgaatcatccatctctaagcaagaaatag
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