Longicatena caecimuris: L3BBH23_06890
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Entry
L3BBH23_06890 CDS
T07231
Symbol
rlmCD
Name
(GenBank) 23S rRNA (uracil-C(5))-methyltransferase RlmCD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
lcg
Longicatena caecimuris
Brite
KEGG Orthology (KO) [BR:
lcg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lcg03009
]
L3BBH23_06890 (rlmCD)
Enzymes [BR:
lcg01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
L3BBH23_06890 (rlmCD)
Ribosome biogenesis [BR:
lcg03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
L3BBH23_06890 (rlmCD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
MTS
Methyltransf_15
Cons_hypoth95
PrmA
TRM5-TYW2_MTfase
Ubie_methyltran
PCMT
Methyltransf_4
Methyltransf_11
Methyltrans_SAM
N6_N4_Mtase
RrnaAD
Methyltransf_32
Methyltransf_12
DOT1
UPF0020
FtsJ
KH_DUF2096_C
Methyltr_RsmB-F
TPMT
Motif
Other DBs
NCBI-ProteinID:
BCT44244
LinkDB
All DBs
Position
730992..732356
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AA seq
454 aa
AA seq
DB search
MKKNEHVFGVCSGYTSDGHGVVKIDGFPLFVKGMMDKESGELVVTLVKKSYGFARLLKLD
KVNEERVNPACPIAKQCGGCQLQHMSYKEQLAFKKQKVQDVIERIAKLNVQVEDVLGMAQ
PDHYRNKGQIPVGVVKGQVVTGFYRINSNTIIDTDSCGIQSEKINAVLQTMRSLFKKYGN
AGVFRHLLIKHAFVTGEVMVVWIVRQKKFAHREEMVQELVQTIPEIKSVVLNLNTREDNV
ILGKQEEVLYGESFITDEINGLKFHISAKSFYQVNPVQTKVLYGKALEFCNLKGNETVID
LYCGVGTISMFLAQKAGKVIGIEIVEQAVRDARENAALNGLDNVKFVCSDAAAYAKKMSE
QGGRADVVVVDPPRKGCDQVTLGSIVQMAPERLVYVSCDPATLARDLRILEGKGYRVEVV
QPVDMFPWTHHVETVVLLSKLKTKKHVDIELQAD
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagaacgaacatgtatttggtgtatgcagcggctatacaagtgatgggcatggg
gttgtgaaaattgatggctttccactgtttgtcaaaggtatgatggataaagaaagtggc
gagcttgttgttacgttggtaaaaaagagttatgggtttgcgcgtttattgaagctggat
aaggtgaatgaagaacgtgtaaatccagcttgtccaatcgcaaaacaatgtggtggctgt
cagctgcagcatatgtcttataaagaacaactggcatttaagaaacagaaggtgcaggat
gttattgagcgcattgcgaaattgaatgtgcaagtggaagatgtcttaggtatggcacaa
cctgatcattatcgcaataaggggcagataccggtaggtgttgtaaaaggacaggtcgta
acagggttttatcgtattaattccaatacgatcattgatacggatagctgtggcattcaa
agtgaaaagatcaatgcggtgttacagacgatgcgaagcttgtttaaaaagtatggaaat
gccggtgtattccgtcatttgttaattaaacatgcctttgtgacaggagaagtcatggtt
gtatggatcgtgcgacagaagaagtttgcacatagggaagaaatggtgcaggagttagta
caaacgataccggagattaaaagcgttgtgttgaatctgaatacacgtgaggacaatgtg
attttagggaaacaggaagaggtactgtatggggagtcgtttattacggatgaaattaac
ggattgaagtttcatatttccgcgaaatcgttttatcaggtgaatcctgtgcagacaaag
gtgctgtatggaaaagcgttggagttttgtaatttaaagggaaatgaaacagtcattgat
ttatattgtggcgtggggactattagtatgtttttggcgcagaaagctgggaaggtcatc
ggtattgaaatcgttgagcaggcggtgcgtgatgccagagagaatgcggccttgaatggc
ttggataatgtgaaatttgtgtgcagtgatgcagcggcgtatgcgaagaagatgagtgag
caagggggaagagcggatgttgtggtagtggatccaccgagaaaagggtgtgatcaggtg
accttgggtagtatcgtgcagatggcaccagagcggttggtgtatgtgtcgtgtgatccg
gcaacgttggcaagagatttacggattttggaggggaaagggtatcgtgttgaggtggtg
cagccggtggatatgttcccgtggacgcatcatgtggagacggtagtactgctttcaaaa
cttaagacgaaaaaacatgtcgacatagaattgcaagccgattag
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