Longicatena caecimuris: L3BBH23_13050
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Entry
L3BBH23_13050 CDS
T07231
Symbol
yheB
Name
(GenBank) oligoribonuclease
KO
K06881
bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:
3.1.3.7
3.1.13.3
]
Organism
lcg
Longicatena caecimuris
Pathway
lcg00920
Sulfur metabolism
lcg01100
Metabolic pathways
lcg01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
lcg00001
]
09100 Metabolism
09102 Energy metabolism
00920 Sulfur metabolism
L3BBH23_13050 (yheB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lcg03400
]
L3BBH23_13050 (yheB)
Enzymes [BR:
lcg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.7 3'(2'),5'-bisphosphate nucleotidase
L3BBH23_13050 (yheB)
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.3 oligonucleotidase
L3BBH23_13050 (yheB)
DNA repair and recombination proteins [BR:
lcg03400
]
Prokaryotic type
Other factors with a suspected DNA repair function
Others
L3BBH23_13050 (yheB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
ASFV_p27
Motif
Other DBs
NCBI-ProteinID:
BCT44860
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All DBs
Position
1410002..1410952
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AA seq
316 aa
AA seq
DB search
MYQALFDLVEQYDIITIYRHVSPDSDALGSQFGLKQWIQDTYPKKQVYALGSSGSGSRDG
NFPAMDVVDDETITQSLAIILDTANSARVDDERFLNAAYRLKIDHHIYVETFADVEIIQD
LKGATCEILADMFMQKGIRISALCAQYLYGGLIADTLRFSISTMTPDTFHVAAYLLTCGV
DVAKANEDNFSTSLRLYRYENYIRANCSVLEEKLAYMIVSKEDYEHYGLTFDEAKEKVFV
MGGVQEFEAWALFIEKERDADGNAIYNGSLRSRQKTINDIANTYHGGGHRFACGVKGLKK
DDINRLLQDLLKRIDE
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgtatcaagcactgtttgatttagttgagcaatatgacattatcacgatatatcgtcat
gtttctccagacagtgatgccttgggttcacagtttggtctcaaacagtggattcaagat
acatatcccaaaaagcaggtatatgctttagggtcgagtggaagcggttcacgtgacggc
aattttcccgcaatggatgttgtagatgatgaaacaataacacagagtctcgctattatc
ttggatacggcgaatagtgcccgtgtggatgatgaacgctttctaaacgctgcctatcga
ttgaaaatagaccatcatatttatgtcgaaacatttgccgatgtagaaattattcaggat
ctgaaaggtgctacatgtgaaatattagcagatatgtttatgcaaaaaggtattcgtata
tctgcactgtgtgcacaatatttatatggtggtttaattgctgacactttacgtttttct
atttcaaccatgacaccagatacgttccacgtggctgcttatttattaacatgtggtgtg
gatgtagctaaggcaaatgaagacaatttttcgacaagtctgcgtctatatcgttatgaa
aattatattcgtgcgaattgcagtgtcttagaagagaaattagcctatatgatcgtatcc
aaagaagattacgagcattatggactgacgtttgatgaggcgaaggaaaaagtatttgtt
atgggcggtgtacaggaatttgaagcatgggccttatttattgaaaaagaacgagatgct
gatggtaacgcaatctataatggtagcctgcgctctcgccaaaaaacgatcaatgatatt
gccaatacttatcatggtggcggacatcgctttgcctgtggggttaagggattaaagaag
gatgacattaatcgcttattacaggacttattaaaacgcattgatgaataa
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