Longicatena caecimuris: L3BBH23_13880
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Entry
L3BBH23_13880 CDS
T07231
Name
(GenBank) pseudouridine synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
lcg
Longicatena caecimuris
Brite
KEGG Orthology (KO) [BR:
lcg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lcg03009
]
L3BBH23_13880
Enzymes [BR:
lcg01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
L3BBH23_13880
Ribosome biogenesis [BR:
lcg03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
L3BBH23_13880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
Motif
Other DBs
NCBI-ProteinID:
BCT44943
LinkDB
All DBs
Position
1487795..1488493
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AA seq
232 aa
AA seq
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MRLDKYLSHAGVGTRKEVKQLIRKKHVRVNGELVVKDDMHVEEDDLVQLDGEHIYYEPFV
YLMLNKPSGVICATQDSEHETVLDCFDVMLPKGCFPVGRLDMDTEGLVLISNDGKLAHHL
LSPKHHVRKTYYVEHQLCLDETAIKTLCNGSIILDEKTVLCAALEVINETSCFFHIEEGR
YHQIKRMFSAVGNEVLYLKRVAMGPLRLDDHLEVGEWRALTQEELAALKAVA
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgcgattagataaatatttatcccatgccggtgtgggaacacgtaaagaagtgaaacaa
ctaattcgcaaaaaacatgtacgtgtgaatggtgaattggtggtaaaagatgatatgcat
gtggaagaagatgatttggttcaactcgatggggaacatatttattatgaacctttcgtc
tatttgatgctgaataaaccaagtggagtcatttgtgctactcaggatagtgaacatgaa
acagtgttagattgttttgatgtcatgttgcccaaaggctgcttcccagttggaagatta
gatatggatacggaagggctggtgctcattagcaatgatgggaaactagcgcatcactta
ctatcacctaagcaccatgtacgtaaaacctattatgtcgagcatcagctatgtttagat
gaaacggcaattaaaacattgtgcaatggaagcatcattttagatgaaaaaacagtatta
tgtgctgcattagaagtcattaatgaaacaagctgtttctttcacattgaagagggccgc
tatcatcagataaaacggatgttttcagctgttggcaatgaggtactgtatttaaaacgc
gtagctatggggcctttgcgattagatgatcatttagaagtgggcgagtggcgagcgctg
acacaggaagagcttgctgctcttaaggcagtcgcatga
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