Longicatena caecimuris: L3BBH23_14210
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Entry
L3BBH23_14210 CDS
T07231
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
lcg
Longicatena caecimuris
Brite
KEGG Orthology (KO) [BR:
lcg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lcg03016
]
L3BBH23_14210 (truB)
Enzymes [BR:
lcg01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
L3BBH23_14210 (truB)
Transfer RNA biogenesis [BR:
lcg03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
L3BBH23_14210 (truB)
Prokaryotic type
L3BBH23_14210 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
BCT44976
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All DBs
Position
1523443..1524237
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AA seq
264 aa
AA seq
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MTSHDVVAQLRKILHIKKIGHSGTLDPNATGVLLVLVGRACKVLPFLADTDKEYIASMEL
GKKTISDDIWEEVLDEKPVIPIKDLQKELDKFRGVIEQVPPMISSIKVNGKKLYEYARNH
EHVIRPVRSVEIYDIQALDEAKLQFRVSCSSGTYVRSLCHDIAENTGNYGCMSSLIRTRV
GRFSIQDCVTLDDVKKGEFILHPIKDVLDHYTSVPYTPISDIYNGKHIRLQCEDNRLAIL
DKGDVIALYERDHGDVFRCIRGLW
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgacttctcacgatgtggttgcacagttgagaaagatccttcatataaagaaaatcggt
cacagtggtacattagaccctaatgcgaccggtgtcttgctcgtgttggttggcagagct
tgtaaagtattaccgtttttagcagatacggataaagaatatatcgcaagcatggaattg
ggcaagaaaaccattagtgatgatatttgggaagaggttttggatgaaaaaccggttata
ccaattaaagatttgcaaaaagaacttgataaatttcgcggtgtgattgaacaggtccct
ccaatgatttcaagtattaaagttaatggaaaaaagctttatgaatatgctcgtaatcat
gagcatgtgatacgcccggtaagaagcgtggaaatttatgatattcaagcacttgatgag
gcaaaactacaatttagggtaagttgtagcagtggcacgtatgtacgttcattgtgccat
gatattgccgaaaacacaggaaactatggatgtatgtcttctttgatccgcacgcgtgtt
gggcgatttagcatacaggattgtgtgacgttagatgatgtgaaaaaaggcgagtttatc
ttacaccctataaaggacgtgttggatcattacacaagtgttccttatacaccaatttca
gatatttataatggaaaacatatacgtttacaatgtgaggataatcgcttggcaatttta
gataaaggtgatgtcatagctttatatgaacgtgatcatggcgatgtctttcgttgtatt
cgcggattgtggtag
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