Longicatena caecimuris: L3BBH23_14760
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Entry
L3BBH23_14760 CDS
T07231
Symbol
nfo
Name
(GenBank) putative endonuclease 4
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
lcg
Longicatena caecimuris
Pathway
lcg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lcg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
L3BBH23_14760 (nfo)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lcg03400
]
L3BBH23_14760 (nfo)
Enzymes [BR:
lcg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
L3BBH23_14760 (nfo)
DNA repair and recombination proteins [BR:
lcg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
L3BBH23_14760 (nfo)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
BCT45031
LinkDB
All DBs
Position
complement(1575965..1576849)
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AA seq
294 aa
AA seq
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MKIGSHVSMSAPEYVLGAVKEAISYGANAFMLYTGAPQNTRRKPMEELRIKEAHEIMKLH
GIEKSSMIVHAPYIINLANCAKAETFELGVDFLAKEIERVKQLEASILVLHPGSHVKAGE
DAGLAKIVDGLDLAMKQIGDVQIAIETMAGKGSELGYNFQHIRYIIDHVKHPENIKVCMD
TCHLHDAGFDLSDFDLLLNEFDAIIGIDRLACVHVNDSKNIQGARKDRHANIGFGEIGYD
KLHAIVHNKRIQDVVKILETPYVDGHAPYKHEIAMLKQGVFDANLLDKLKNEVV
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgaaaataggtagtcatgtatctatgtctgctcctgaatatgtattaggagccgtaaaa
gaagctatttcatatggtgcaaatgcatttatgttatatacaggtgcacctcaaaataca
cgcagaaagccaatggaagaactgcgcataaaagaagcacatgagatcatgaagttacat
ggtatagaaaaaagcagcatgatcgtacatgcaccatatatcatcaatttagcaaattgt
gcgaaagcagaaacatttgaactcggtgttgattttttggcaaaggaaattgaacgtgtc
aaacaattagaagcaagcattttggtcttacatcctggcagtcatgtaaaagccggcgaa
gatgctggacttgctaagatcgtagatggattagatctagctatgaaacagattggtgat
gtacagatagcaatcgagacgatggcagggaaaggtagcgaacttggctataattttcag
catattcgctatatcattgatcatgtgaaacatcctgaaaatatcaaggtttgtatggat
acttgtcatttgcatgatgcaggattcgatttaagtgattttgatcttcttttgaatgaa
tttgatgcgatcattgggatagatcgtttagcatgtgtacatgttaatgattcaaaaaat
attcaaggtgctcgtaaggatcgtcatgcgaatattggctttggcgaaattggctatgat
aagctgcatgcaatcgtacataacaagcgaattcaagatgtcgttaaaatattagaaaca
ccttatgtggacggacatgcaccatataagcatgaaatcgcaatgttaaaacaaggtgtt
tttgatgcgaatttattggacaagttaaaaaatgaagttgtgtaa
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