Longicatena caecimuris: L3BBH23_15600
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Entry
L3BBH23_15600 CDS
T07231
Name
(GenBank) hypothetical protein
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
lcg
Longicatena caecimuris
Pathway
lcg03410
Base excision repair
lcg03430
Mismatch repair
lcg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lcg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
L3BBH23_15600
03430 Mismatch repair
L3BBH23_15600
03440 Homologous recombination
L3BBH23_15600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lcg03400
]
L3BBH23_15600
DNA repair and recombination proteins [BR:
lcg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
L3BBH23_15600
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
L3BBH23_15600
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
L3BBH23_15600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
BCT45115
LinkDB
All DBs
Position
complement(1662476..1664080)
Genome browser
AA seq
534 aa
AA seq
DB search
MKINKLSTQRMEDIQSTFGLPPLCAKVLAAKGLANDEIAALLQEPKLSDPFCANGVKEVA
DRLYQAKQKKEKVLVCGDYDADGICATAIMVDALRSYGIDCGFYIPNRFSEGYGLHENTV
GLAKQKGYTLLITVDNGVKAKTALSFAHTMGIDVIVTDHHSMDEEVTCLQLVHPTLMGES
FTTLSGAGVALMLSRALIGEKKEHVVLACVAAIADVMPLHKETRAIVKLGISYLKQGICP
PIRFLAKERYPKWDEMLIAYQIVPKLNVTGRLADMVNVNNTVKYLLSTSMEEIQHVAKQI
NDLNEKRKVMSDDMLLKAKTLVHEEYRFQLLFDDSFHEGMAGLVAGKLAEELQMPVMVAA
RNQDHFKGSIRSQGLLDLTTFFDECKPSLVSFGGHKAAAGIGFSYDKKQVIQDYVNSRME
QVVFDNDSSYDVIAVERSEITIAEVESLQLLAPFGEGFEEPLFLLEKQKVQDCRSLSKGA
HTKWILSDDLEAMQFQSRDWEFYNPEATLNFIGNLRINSFMGRKKVNIYVSKAY
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgaagataaataagctatcgacacaacgaatggaagatatacagagtacttttggtttg
cctcccttatgcgcaaaggtcttagcagcaaaaggtttagccaatgatgaaatagcagca
ttattacaggagcctaaactctctgatccgttttgtgcaaatggtgtaaaagaggtggct
gatcgtttgtatcaagcaaagcaaaagaaagaaaaagtattggtttgtggagactatgat
gcagatggtatttgcgctaccgctattatggtggatgctttacgctcttatgggattgat
tgtgggttttatattccaaatcgatttagtgaaggatatggcttacacgagaataccgta
ggtttggctaaacaaaagggctatacacttttaataaccgtagataacggtgtgaaagcg
aaaacggcattatcatttgcacacacgatgggaattgatgtgatcgttacagatcatcac
agtatggatgaagaagtcacatgtttgcaactggtgcacccaacattgatgggagaatca
tttacgacattaagtggtgcaggtgtggctttgatgctttccagggcattgattggtgaa
aaaaaagaacatgtcgttttggcatgtgtggcggcaattgcggatgtcatgcctttgcat
aaggaaacaagagcgattgtgaaattaggtatttcttatttaaaacagggtatctgtcca
ccaatccgttttctggctaaagagcgttatcctaagtgggatgagatgctgatagcttat
caaatcgtgccgaaactaaatgtgacaggtcgattagcggatatggtcaatgtaaataat
acggtaaaatatttattgtcaacatctatggaagaaattcaacatgtggcaaaacaaata
aatgacttgaatgaaaaaagaaaagtcatgagtgatgatatgcttttaaaagccaaaacc
ttagtgcatgaggaatatcgatttcaattactgtttgatgattcttttcatgaagggatg
gctggacttgtggccggaaaattggctgaagaattgcaaatgccagttatggtggcagcc
cgcaatcaggatcactttaaaggaagtattcgttcacaaggtttgttggatctgacaacg
ttttttgatgaatgtaaaccttctttagttagttttgggggacataaagcagcggcaggc
ataggcttttcttatgataaaaaacaagtgattcaagattatgttaacagccgtatggaa
caggttgtatttgataatgatagtagctatgatgtcattgctgtggaacgaagcgaaatt
accattgcagaagttgagagtctgcagttattagcaccatttggagaaggttttgaagaa
ccgttgttcttattggaaaagcagaaggtgcaggattgccgtagcttaagcaagggagca
cataccaaatggatcttatctgatgatttagaagctatgcagtttcaaagtcgcgattgg
gaattctataacccagaggcgaccctgaattttataggaaatttacgtataaattctttc
atgggacgaaaaaaagtaaatatttacgtctccaaggcatattag
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