Longicatena caecimuris: L3BBH23_16930
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Entry
L3BBH23_16930 CDS
T07231
Symbol
polA
Name
(GenBank) DNA polymerase
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
lcg
Longicatena caecimuris
Pathway
lcg03030
DNA replication
lcg03410
Base excision repair
lcg03420
Nucleotide excision repair
lcg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lcg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
L3BBH23_16930 (polA)
03410 Base excision repair
L3BBH23_16930 (polA)
03420 Nucleotide excision repair
L3BBH23_16930 (polA)
03440 Homologous recombination
L3BBH23_16930 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lcg03032
]
L3BBH23_16930 (polA)
03400 DNA repair and recombination proteins [BR:
lcg03400
]
L3BBH23_16930 (polA)
Enzymes [BR:
lcg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
L3BBH23_16930 (polA)
DNA replication proteins [BR:
lcg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
L3BBH23_16930 (polA)
DNA repair and recombination proteins [BR:
lcg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
L3BBH23_16930 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
L3BBH23_16930 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
HHH_5
Rota_NS35_N
Motif
Other DBs
NCBI-ProteinID:
BCT45248
LinkDB
All DBs
Position
complement(1802338..1804923)
Genome browser
AA seq
861 aa
AA seq
DB search
MKKLLLIDGNSMLFRAYYATVYGRMMKTSNGIPTNAVYGFITMINKAFDMIHPDMVLVAW
DSGKPTFRHETYTEYKGTRKELDQELIVQFPIAREYLDAYGLQRYECDGIEADDIIGCMA
RQHPELEIHILSSDRDLLQLIDPTTDVYLMKKGISEIEVMNEEKLMETMGIKPSQIIDLK
ALMGDSADNIPGVKGIGEKTALKLLKEYDTVDNVYAHIEEIKGKLKEKLETDREKAFLSK
YLATIKTDETLPIDITALMLQPPKEELHDFYIKYEMNSFAKNTRKKEEVTRDGTYAVVQK
ISEAFYDGHSVVYADIDNENYYDATLYGFALSKENKNEYITLEDARKDPAFLQYLATKND
KAVYDAKNFYHACHKNNLIAADVNFDIMLAAFLVDQTISDYEKLAEKYHFDQSIHKEDIY
GKKGKPKLIDFAQQSKYAMLQAENLYSIVALLDETLQEMEMKDLFDTIEMPLTRVLYAME
KEGVYCDKAVLQKIADETEAKINALSLQIYEIAGMEFNINSPKQLASVLYDELGLKAGKK
RSTAADVLEKLVHVHPIIPLLLEHRKYQKIYSTYAIGLAKHILADGKIHTLFNQIQTQTG
RLSSSEPNLQNISVRNEEGKGIRKAFVASEGHVLLSADYSQIELRMLAHMADEEQMIDAF
NHDIDIHTKTAMQIFDVSHDEVDANMRRSAKTVNFGIVYGQSDFGLSEQLGISRKEAHTF
IEKYFASYPKIKTFMDATIAYCEEHGYVKTLYNRRRYIKEIADKNYMMREFGKRAAMNAP
IQGSAADLIKMAMIHIYQKMQEEKVKSRMILQIHDELIFDVCEDEIDKMTQIVEEGMQNV
MKLKVPLIAQANIGKSWYDAK
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaactattattaattgatggaaattccatgctgtttcgtgcctattatgcaacc
gtatatggacgcatgatgaaaaccagcaatggaataccgacaaatgcagtatatggcttt
atcacaatgattaataaagcctttgatatgatacatccggatatggtgttagtggcttgg
gatagtggaaaaccaacctttcgccatgaaacttatacggagtataaagggacacgtaaa
gaattagatcaagaattgatcgtgcagtttccaattgctcgtgaatatttggatgcgtat
ggtttacagcgttatgaatgcgatggtattgaggcagatgatatcataggctgcatggca
cgacagcatcctgaattagagattcatattttatcaagtgatcgagatttattacaattg
attgatcctacgaccgatgtctatctaatgaaaaaaggtatcagtgaaattgaggtcatg
aatgaagaaaaattgatggagacaatggggattaagccttcacagattatcgatttgaaa
gcattgatgggagatagtgcagacaatatcccaggggtaaaaggtattggcgaaaagaca
gcattaaaactgttaaaggaatatgataccgttgataatgtttatgctcacattgaggaa
atcaaaggaaaactgaaagaaaaattggaaacagatagggaaaaagcctttttatcaaaa
tatctggcaacaattaaaaccgatgaaaccttgcctattgatattacagcgttgatgctg
cagcctcccaaagaagaactgcatgatttttatataaaatatgaaatgaatagttttgca
aaaaatacacgtaaaaaagaagaggtaacgcgtgatggaacctatgcagtagtgcaaaag
atatcagaagcattttatgatggacatagtgttgtttatgcagatatcgataatgaaaat
tattatgatgctacattatatggttttgcattaagcaaagaaaataaaaatgaatacatc
actttagaagatgcaagaaaagatccggcgtttttacagtatctagctacaaaaaatgac
aaggcggtttatgatgcgaaaaacttctatcatgcttgtcataaaaataacctaatcgca
gcagatgtgaactttgatattatgctggcagcctttttagttgatcaaaccatttctgat
tatgagaagttggcagaaaaatatcactttgatcaaagtattcataaagaggatatctat
ggcaaaaaagggaagccaaaactcatcgattttgcgcaacaaagcaaatatgctatgttg
caggcagaaaatttatatagtattgtagctttattagatgaaaccttgcaagaaatggaa
atgaaggatttgtttgatacaattgagatgccattaacgcgcgtattgtatgccatggaa
aaagaaggcgtatattgtgataaggcagttttacaaaaaattgccgatgaaacagaagct
aagatcaacgcgttaagtttgcagatttatgaaatagcagggatggagttcaatatcaat
tcacctaagcagttggcatctgtattgtatgatgaattaggtttaaaggcaggcaagaaa
cgtagtacagcagccgatgtcttagaaaaacttgtgcatgtacatccaatcattcctctg
ttgttggagcatcgcaaatatcagaagatttatagtacatatgcaatcggtttggcaaaa
catattttggcagatgggaaaatacatacgcttttcaatcagattcagacacagacggga
cgattatcgtcttcagaacctaatttacaaaatatatccgtacgtaatgaagaaggaaaa
ggtatccgcaaagcctttgtggcaagtgagggacatgttctgttatctgctgattattca
cagattgaattgcggatgttggcacatatggcagatgaggaacagatgatcgatgcgttt
aaccatgatatcgatattcataccaaaacagccatgcaaatatttgatgtttcacatgat
gaagtagatgccaatatgcgtcgcagtgcgaaaaccgtgaattttggtattgtctatgga
caaagtgatttcggtctaagtgagcaattgggcatttcacggaaagaagctcataccttt
attgaaaaatactttgcttcctatccgaagatcaaaacctttatggatgcgactattgct
tactgtgaagaacatggctatgtgaaaacattatataatcgacgtcgttacataaaagag
atagcagataaaaattatatgatgcgtgaatttggaaaacgggcggctatgaatgcacca
atacaaggaagcgctgcagatctgattaaaatggcgatgatacacatctatcaaaaaatg
caggaagaaaaggtgaaatcgcgtatgattttacagattcatgatgagcttatctttgat
gtatgtgaagatgaaattgataagatgacacaaattgtagaagaaggcatgcaaaatgtt
atgaaattaaaagtaccgctcattgcacaagcaaatatcggcaagagttggtatgatgca
aagtag
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