Longicatena caecimuris: L3BBH23_17110
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Entry
L3BBH23_17110 CDS
T07231
Symbol
sbcC
Name
(GenBank) nuclease SbcCD subunit C
KO
K03546
DNA repair protein SbcC/Rad50
Organism
lcg
Longicatena caecimuris
Brite
KEGG Orthology (KO) [BR:
lcg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lcg03400
]
L3BBH23_17110 (sbcC)
DNA repair and recombination proteins [BR:
lcg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
L3BBH23_17110 (sbcC)
Archaeal homologous recombinant proteins
L3BBH23_17110 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcC_Walker_B
AAA_23
SMC_N
AAA_29
AAA_21
AAA_22
Motif
Other DBs
NCBI-ProteinID:
BCT45266
LinkDB
All DBs
Position
complement(1821057..1824086)
Genome browser
AA seq
1009 aa
AA seq
DB search
MLPKRLEVQAFGPYVKKQQIDFTQFMKDRLFLLEGETGSGKTMLLDAMTYALYGKSSGGQ
REDLESMRSRFASEQMPTIVDFTFTIKEKEYRFFRSVEVRTKRNKEKAYKVNVDAGEMID
GCFHPFFENPKLRSVEEKAQELIGLSYLQFVQVMLLPQGKFEQFLTSRSEEKQDILKTLF
QMERWSSINGWLTDKLNQKRNALDLLKQQMAADLRSLNEESMQAAQQTYASLTEQIAQDN
EQKNALLQQQENVQADLLQQKEYHRWKEDYKLKQQQYEKEKQQEGQMKQQKEQVLRWKQM
QQLRHMYQEMQRLQKAKELREAQYIQAKDRKQKASQQYACLDEQNKSIQGYEEQIQTARE
QLLQCEEQLRLLKTFDKQKQQSEQLATAYQAIHKQNIEWKQKNMALQKTQQLLQQEIQAF
EQEAKQHEQLKADWQYYVLAEKRYQKQTALQEQMNKQKQAWMNAQSAYQQQQETLKKRQQ
QHDALYQQFLEHSALQLAESLQEGKPCPVCGSFHHPKPYVAQKAAVDLLTLRSLKQQLEE
GKQKEEQLYRLEEKQQAAYALLKKQLKDIQTQIQELLQKPFLLEEYHQIKKQYKELIKAE
ERQSQRRQKLQVLQSSALQRQEQLEASLLQEQTKQQNYLMAKAEVAALQKRLPQQDLKQL
QTQYEQQQKSLKYLQEQKNLQLQQREASIIEYNKAIEHYQTSEQEYRQAQQQLQQQQEQL
EEEVVKQQVKIVELETMPSDTDIENSASEVERYFLNLAHLEEEIRKQEEYLAKIVWLDLD
KLVAQDAKLKEELLQIQECLAQRQSEQKIYARTLSALQNQMKELAIVEPDYLRMQHFVKA
MRGDQGIGIERYVLGVLLDNITTQANKLLAHIHEGRYQIFRNDDTTGRSRKYGLELSIFD
TYSMEPRNVVSLSGGEKFLVSLAMSLALSMVVQARNGGIRFDCMFIDEGFGTLDEHSIAD
ALAILQTMTQGKGMIGIISHVEILKENIQAGIAVVKTREGSYIQIRKGA
NT seq
3030 nt
NT seq
+upstream
nt +downstream
nt
atgctgccaaaacgattggaagtacaggcatttggtccatatgtaaagaaacagcaaatt
gattttacacaatttatgaaggatcgcctatttcttttggaaggagaaaccggaagtggc
aagacgatgttgttagatgccatgacatatgccttatatggaaagagcagcggtggacag
cgggaagatctggaaagtatgcgttctcgctttgcttctgagcaaatgcctacgattgtt
gattttacgtttacgatcaaggagaaggaatatcgattttttcgaagtgttgaagttcgc
accaaacgaaataaagaaaaggcatataaagtgaatgtcgatgctggtgaaatgatcgat
ggttgctttcatcctttctttgagaatcctaaattgcgtagtgtcgaagaaaaggcacaa
gaactgattggtttatcctatttacaatttgtgcaggtgatgcttttgccacaaggaaaa
tttgaacaatttttaacaagtcgtagtgaagagaagcaagatatcctgaaaacattattt
cagatggaacgctggagctctataaatggatggcttacagataaactgaatcagaaacgg
aatgccttagatcttttaaaacagcaaatggcagcggatttacgttctttaaatgaagaa
agcatgcaagcagcacagcaaacctatgcttcgctcacggaacagattgcacaggacaat
gaacaaaaaaacgcacttttacagcagcaggaaaacgttcaagcggatcttttacagcag
aaagaatatcatcgttggaaagaagactataagctgaaacaacaacaatatgaaaaagag
aagcaacaagaagggcaaatgaagcaacaaaaagagcaggtactgcgttggaagcagatg
cagcaactgcggcatatgtatcaggaaatgcagcgcttgcaaaaagcgaaggaattacgt
gaagcacaatatatacaggcaaaggacagaaaacagaaagctagccagcaatatgcttgt
ttggatgagcaaaataaaagcattcagggctatgaagagcaaatacagactgcaagagaa
caattgctacagtgcgaagagcaactgcggttgttaaaaacctttgataagcaaaaacaa
caaagtgaacagctggcaacagcataccaggcaatacataaacagaatatcgaatggaag
caaaagaatatggcattacaaaagacacagcagttgttgcagcaagaaatacaagcgttt
gaacaagaagcaaagcaacatgaacaactcaaagcagattggcagtattacgtgctagca
gaaaaacgttatcaaaaacaaacagcgttacaagaacagatgaacaagcagaaacaggca
tggatgaatgcgcaatctgcgtatcagcaacaacaggaaactttaaaaaaacggcagcag
caacatgatgcattgtatcagcagtttttagaacacagtgctttacagttggcagaaagt
ttgcaggaaggaaagccatgtcctgtctgtggttcttttcatcatccaaaaccatatgta
gcacaaaaagccgccgttgatttgcttacgcttcgctctttgaaacaacagttggaagaa
ggaaagcaaaaggaagaacaactgtatcgtttagaagaaaagcaacaagctgcctatgcc
ttgttaaagaaacagcttaaggatattcaaacgcaaatacaggaattattacaaaaaccg
ttccttttggaagaatatcaccagatcaaaaagcagtataaagagctaattaaagcagaa
gaaaggcagagccaaaggcggcaaaagttacaagtattacaatccagtgctttgcaaaga
caagaacaattggaagcttcccttttacaagagcagacaaagcaacaaaactatctaatg
gccaaagcagaagtagctgccttacaaaagcgacttccacaacaagatttaaagcagtta
cagacgcaatatgaacaacagcaaaagagtctgaaatacttacaagagcaaaagaatcta
cagcttcagcaaagggaagcaagcatcattgaatacaataaggctattgaacattatcag
accagcgaacaggaatatagacaggcgcagcaacagttacagcaacaacaagaacaactg
gaagaagaagttgtcaaacaacaggtcaagatagtggaactggaaacaatgccatctgat
acggatattgaaaacagtgcaagtgaggttgaacgttactttttgaaccttgctcattta
gaagaagaaatacgaaaacaagaagaatacttggccaagatcgtatggcttgatctagat
aaacttgttgcacaagatgctaaacttaaggaagaactgttgcaaatacaggaatgctta
gcgcaaagacaaagtgaacaaaagatctatgcgcgcactttgtctgcattacaaaatcaa
atgaaagaattagcaattgttgaaccagattatcttcgcatgcagcactttgtaaaagca
atgcgcggagatcaaggcattggcatagaacgctatgtcttaggggtattattagataac
atcaccacccaagccaataagctgttagcccatatccatgaaggtcgctatcagattttt
cgcaatgatgatacaactggaagaagtcgcaaatatggcttagagctatctatttttgac
acctattccatggaaccacgaaatgtggtatccttaagtggaggagaaaaattcttagta
tccttagccatgtccttagcactatccatggtcgtacaagcaaggaatggcggaatccgt
tttgattgtatgtttattgatgaaggtttcggtactctggatgagcatagcatagcggac
gcattggctatcttgcagacaatgacacaaggcaaaggcatgattggtatcatttcccat
gtggaaattttaaaggaaaatattcaggcaggtatcgctgttgttaaaaccagagaaggc
agttatatccaaatacgaaagggagcataa
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