Longicatena caecimuris: L3BBH23_18900
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Entry
L3BBH23_18900 CDS
T07231
Symbol
yhaM
Name
(GenBank) 3'-5' exoribonuclease YhaM
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
lcg
Longicatena caecimuris
Brite
KEGG Orthology (KO) [BR:
lcg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcg03019
]
L3BBH23_18900 (yhaM)
Messenger RNA biogenesis [BR:
lcg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
L3BBH23_18900 (yhaM)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
HDOD
Motif
Other DBs
NCBI-ProteinID:
BCT45445
LinkDB
All DBs
Position
complement(2019636..2020589)
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AA seq
317 aa
AA seq
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MNKTLAELEDGFRGEITVLLLQVNKGVTAKGAPYLSFQLQDKTGSMDAKYWNVPENLLYA
YKPGMLVKVSGDVLCHQKQLQFRVNHMEEVNDEEYDIWNFVKSGPIAKDELQKEITAYVA
SIRNEAIHAITQAFITDYEKDFYTYPAAMKNHHDFVSGLATHVLGMLHMADALCKQYTLL
NRDLLIAGVILHDIGKLIELSGAVVTDYTKEGKLLGHISIMQSKVEEKAKQLGYTGEEVL
LLRHMILAHHGQYAYGSPVLPMIPEAEMLYLLDNMDARMQSMEKALAPIEPGGFTPRIFA
MENRFLYKSTLGNNSKK
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaacattagcagagcttgaagatggttttcgtggggaaatcacggtattgcta
cttcaggtaaataaaggcgtcacagcgaagggagcaccctatctgtcctttcaattacaa
gataagacaggcagcatggatgcgaaatattggaatgttccagagaacttgttatatgct
tataaaccgggaatgttggttaaagtgagtggtgatgtcttatgtcatcaaaaacagctt
cagtttcgtgtaaatcacatggaagaagtaaatgatgaagaatatgatatttggaacttt
gtgaagagtggaccaattgcgaaagatgaattacaaaaagaaattacggcttatgtagca
tctattcgaaatgaagccattcatgcaatcacacaagcgtttatcacggattatgaaaaa
gatttttatacatatccggcagctatgaaaaatcatcatgattttgtgagtggcttggca
acccatgtgttaggcatgctgcatatggcggatgctttatgcaagcaatacacattgttg
aatcgtgatctgttgattgccggagtgatcttacatgatatcggaaaactgattgaatta
agcggagcggttgtgacggattataccaaagaaggcaaattgttgggacatatcagtatt
atgcaaagcaaagtggaagaaaaagcaaaacagcttggttatacaggggaagaggtgctg
ttgctgcgacatatgatccttgctcatcatggacaatacgcttatggatctccggtgtta
ccaatgattccagaagcggaaatgctgtacttgctggataatatggatgcacgtatgcag
tcaatggaaaaggcattggcaccaatagagccaggaggctttactccgcgcatctttgcg
atggaaaatcgctttctttataaaagtacattagggaataactcaaaaaaatga
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