Leptothrix cholodnii: Lcho_0002
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Entry
Lcho_0002 CDS
T00681
Name
(GenBank) DNA polymerase III, beta subunit
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
lch
Leptothrix cholodnii
Pathway
lch03030
DNA replication
lch03430
Mismatch repair
lch03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lch00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Lcho_0002
03430 Mismatch repair
Lcho_0002
03440 Homologous recombination
Lcho_0002
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lch03032
]
Lcho_0002
03400 DNA repair and recombination proteins [BR:
lch03400
]
Lcho_0002
Enzymes [BR:
lch01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Lcho_0002
DNA replication proteins [BR:
lch03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Lcho_0002
DNA repair and recombination proteins [BR:
lch03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Lcho_0002
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_beta
DNA_pol3_beta_3
DNA_pol3_beta_2
Motif
Other DBs
NCBI-ProteinID:
ACB32278
UniProt:
B1Y548
LinkDB
All DBs
Position
1718..2863
Genome browser
AA seq
381 aa
AA seq
DB search
MIVLKAAQEQVLGALQAVSGIVERRHTLPILANVLIRKSGGRTELTTSDLEIQVRTAAEL
GGDESAFSTTVGARKLIDILRMLPSDQIVTLTAAQNKLTLQGGKSRFTLQTLPADDFPLV
QEAADFGPAFSVPQKTLKSLIDQVHFAMAVHDIRYYLNGILFVAEGKTLTLVATDGHRLA
LAQATLEAEIPKQEVILPRKTVLELQRLLKDDKASKEAAKQEGAEEPRIEMRFADNQAKF
SFGGMEFVTKLVEGKFPDYNRVIPRNHKNHVTLGRAPLLASLQRAAILTSEKFKGVRVNF
EPGTLRIASSNAEQEEAKEELEIDYGGDAIEIGFNVTYLMDVLANVNEDMVTLSLQDASS
SALITVPERSGFKYVVMPMRI
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgatcgtcctgaaagcagcgcaggaacaggttctgggcgccctgcaagcggtttccggc
atcgtcgagcgacgccacacccttccgatcctggccaacgtgctgatccgcaagagcggc
ggccgcaccgaactgacgaccagcgacctggaaatccaggtccgcaccgccgccgaactg
ggtggtgacgaaagcgccttcagcaccacggtcggcgcgcgcaagctgatcgacatcctg
cgcatgctgccgtccgaccagatcgtgacgctgaccgcggcgcagaacaagctcacgctg
caaggcggcaagagccgtttcacgctgcagacgctgccggccgacgacttcccgctggtg
caggaagccgccgacttcggccccgccttcagcgtgccgcagaagacgctcaagagcctg
atcgaccaggtgcacttcgcgatggcggtgcacgacatccgctactacctcaacggcatc
ctgttcgtcgccgaaggcaagacgctgacgctggtggccaccgacggccaccgcctggcg
ctcgcccaggccacgctcgaagccgagatcccgaagcaggaggtgatcctgccgcgcaag
accgtgctcgaactgcagcgcctcttgaaggacgacaaggccagcaaggaagccgccaag
caggaaggcgccgaagagccgcgcatcgagatgcgctttgccgacaaccaggccaagttc
agcttcggcggcatggagttcgtcaccaagctggtcgagggcaagttccccgactacaac
cgcgtcatcccgcgcaaccacaagaaccacgtcacgctcggccgtgcgccgctgctggcc
agcctgcagcgcgccgcgatcctgacgagcgagaagttcaagggcgtgcgcgtcaacttc
gagcccggcaccttgcgcatcgcctccagcaatgccgagcaggaagaagccaaggaagag
ctcgagatcgactacggcggcgacgccatcgagatcggcttcaacgtcacctacctgatg
gacgtgctggccaacgtcaacgaggacatggtgacgctgtcgctgcaggacgccagcagc
tcggcgctgatcaccgtgcccgagcgcagcggcttcaagtacgtcgtgatgccgatgcgg
atttga
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