Leptothrix cholodnii: Lcho_0017
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Entry
Lcho_0017 CDS
T00681
Name
(GenBank) tetratricopeptide TPR_2 repeat protein
KO
K21007
polysaccharide biosynthesis protein PelB
Organism
lch
Leptothrix cholodnii
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Gene cluster
GFIT
Motif
Pfam:
TPR_15
TPR_19
TPR_14
Motif
Other DBs
NCBI-ProteinID:
ACB32293
UniProt:
B1Y563
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Position
19153..22902
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AA seq
1249 aa
AA seq
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MDQRRSRLRAPDASLRERIISTGGLFSVAAMVALVLVLLFPRDTLIARLHTEARNDPLSA
HYLTILLRSESDNADLRLLLAERHHALGQLERADAVLTPLLAELPDPARQRRARQLHLEV
RQRQLAALAPASAPARHLRDELLHELKTLPQADWTPEQLLDFARLASELGEAELARQFHA
RGGPALAVGADSFEDAVRKALGAGDYLGAAGLHREAMQVAASPDERRQHLMAALRILQSG
NRLEDALQLAREHDGVVGSDDRLLRYLIELSLAANRPAVGGPYARRLMRMSRHEVREPGW
AERLAGALLPSAHAAEPAAAADPAAGDPQRPFDEATYLLAYQTFLATGNQADAFRVARAA
VRRAPELRAWRERLAQVAEWHGRPADALVQWRWLAAQSPEPAQAAHAMAQVLRLAPALND
HATLLDAWQQIARQRPLSQAETLALAALHEQLGQPQDALALLRERDAADPQTVWLEARVA
LLERLGDVPATLDALAQLVARDGVTRERALRLATLHADRGDVRQAYEAIAPLADRVPEDD
DEVWRQLAELSWALQLEPEALRALQVRARRDDFSADEADHLIALLRERRPDEAAQLAEAT
WRRRQSPDHLMLAIELWWAQRDLVQLQRLFASVTPDEQARVGRESAFLYLRSLWQSARGE
HAAARLDMRRALVAEPQDVALRSTLIFMLIEAGERDELARLVDETVSVGAADARLDAALA
AAWGALGQPRRALPFWRRQAAERRGDALWMFGYADALLAADWPQVTEAVQRQALDAIRRR
PAARSADAAPADAESRAVMLQVARLTLARAPGDPSLAVLRRLLQQQGGPAADPAFDAAAD
ELALSWLLSGEQFEPARVWLWQRYARLLSAPPWAALMLALHERDLDAVQRLYTRHLATLP
ASTRIEALSALGRRAEAHDLRVAELGRRDDDALHEALVNEAWARPRALEWGWTRHRSGVQ
TDVAALLLRAPVDAATQAELQFERIGLRSTDARALTGVPAQAEALLLTLRHAIDPASEAT
LTLGRHGAWADTPRLALAARTRLDGGVQLQAAIDWNQPTEESSALAVAGVRHRLLLAVDL
PIAPTTQAHVELQALAFGLQDGPRLGGGVGLEWTLTQWLRLAQPDLAVRVFGSHRRHHAA
DTVLPAATARLDPSGSVPGAGFFMPAGYALYGVGLSSGVALREAASRAWRPFADLRLTRH
DQLGVGHGASLGLAGSLLGGDQLALSVSLLRDGAGGSGREAGLRYALRF
NT seq
3750 nt
NT seq
+upstream
nt +downstream
nt
atggatcagcgacgatcacgattgcgtgcccctgacgcgagcctgcgcgaacgcatcatc
tccaccggcggcctgttctcggtggcggcgatggtggcgctggtgctggtgctgctgttc
ccgcgcgacacgctgatcgcgcggctgcacaccgaggcccgcaacgacccgctcagcgcc
cactacctgaccatcctgctgcgcagcgagtccgacaacgccgacctgcgcctgctgctg
gccgagcgccatcacgcgctcggccagctcgagcgcgccgacgcggtgctcaccccgctg
ctggccgagctgcccgatccggcccggcagcgccgcgcccggcagctccatctcgaggtg
cgccagcgccagctggcggcgctggcgccggccagcgcgccggcccggcatctgcgcgac
gagctcctgcacgagctgaagaccttgccgcaggccgactggacacccgagcagctgctc
gatttcgcccgcctcgccagcgagctcggcgaggccgaactggcgcgccagttccacgcc
cgcggcgggccggcgctggcggtcggcgccgacagcttcgaggacgccgtgcgcaaggcc
ctcggtgccggcgactacctcggcgcggcaggcctgcaccgcgaggcgatgcaggtcgcg
gcctcgcccgacgaacggcgccagcacctgatggcggcgctgcgcatcctgcagtcgggc
aaccggctcgaagacgcgctgcagctggcgcgcgagcacgacggcgtggtcggcagcgac
gaccggctgctgcgctacctgatcgagctgtcgctggcggccaaccggccggccgtcggc
ggcccctacgcgcggcgcctgatgcgcatgagccggcacgaggtgcgcgagccgggctgg
gccgagcgcctggccggcgcgctgctgccgagcgcccacgccgccgagccggccgcggcc
gccgatcccgccgccggcgacccgcagcggccgttcgacgaggccacctacctgctcgcc
taccagaccttcctggccaccggcaaccaggccgacgcctttcgggtggcgcgcgctgcg
gtgcgcagggcgcccgaactgcgggcctggcgcgaacggctggcgcaggtcgccgagtgg
cacggccgcccggccgacgccctggtgcagtggcgctggctggccgcgcaatcgcccgag
ccggcgcaggccgcgcacgcgatggcccaggtgctgcgcctggcgccggcgctcaacgac
cacgccacgctgctcgacgcctggcagcagatcgcccgccagcgcccgctcagccaggcc
gagacgctcgcgctggccgcgctgcacgagcagctcggccagccgcaggacgcgctggcg
ctgctgcgcgaacgcgatgccgccgatccgcagacggtctggctcgaggcccgcgtggcc
ctgctcgaacgcctgggcgacgtgcccgccaccctcgacgcgctggcgcagctggtggcc
cgcgacggcgtcacccgcgagcgtgcgctgcgcctggccaccctgcacgccgatcgcggc
gacgtgcgccaggcctacgaggcgatcgcgccgctggccgatcgggtgcccgaggacgac
gacgaggtctggcggcagctggccgagctgagctgggcgctgcagctcgagcccgaggcg
ctgcgggcgctgcaggtgcgggcccggcgcgacgacttcagcgccgacgaggccgatcac
ctgatcgcgctgctgcgcgagcgccggcccgacgaagcggcgcagctggccgaggcgacc
tggcggcgccggcagagccccgaccacctgatgcttgcgatcgagctgtggtgggcgcag
cgcgacctggtccagctgcaacggctgttcgcctcggtgacgcccgacgagcaggcccgg
gtcggccgcgaaagcgccttcctgtacctgcgttcgctgtggcagtcggcccgtggtgaa
cacgccgccgcacgcctggacatgcggcgcgcgctggtcgccgagccgcaggacgtcgcg
ctgcgcagcacgctgatcttcatgctgatcgaggccggcgagcgcgacgagctggcccgg
ctggtcgacgagacggtgtccgtcggcgccgccgatgcgcgcctggatgcggccctggcg
gccgcctggggcgcgctcggccagccgcgccgcgccctgccgttctggcgccgccaggcc
gccgagcggcgtggcgatgcgctgtggatgttcggttacgccgacgccctgctggccgcc
gactggccgcaggtgaccgaggcggtgcagcgccaggcgctcgacgcgatccgccgacgg
ccggctgcgcgcagtgccgacgccgcgccggccgatgccgagtcgcgcgccgtgatgctg
caggtggcacggctgacgctggcgcgcgcgcccggtgatccgagcctggcggtgctgcgc
cggctgctgcagcagcaaggcgggcccgccgccgacccggccttcgacgccgctgccgac
gagctggcgctgagctggctgctgtcgggcgaacagttcgagccggcgcgggtctggctg
tggcaacgctacgcgcgtctgctctcggcgccgccgtgggccgcgctgatgctggcgctg
cacgagcgcgatctcgatgcggtgcagcgcctgtacacccggcacctggccacgctgccg
gcgtcgacccgcatcgaggccctgagcgcgctcggccgccgtgccgaggcccacgacctg
cgcgtggccgaactgggtcgccgcgacgacgatgccctgcacgaggcgctggtcaacgag
gcctgggcccgtccgcgcgcgctcgaatggggctggacccggcaccgcagcggcgtgcag
accgacgtcgccgcgctgctgctgcgcgcaccggtcgatgctgccacccaggccgagctg
cagttcgagcgcatcggcctgcgcagcaccgacgcgcgcgcgctgaccggcgtgcccgca
caggccgaggcgctgctgctgaccctgcgccacgccatcgacccggccagcgaggccacg
ctgaccctgggccgccacggtgcctgggccgacaccccccgcctggccctggccgcgcgc
acccgcctcgatggcggcgtgcagctgcaggccgcgatcgactggaaccagccgaccgaa
gaaagcagcgcgctcgcggtggccggcgtgcgccaccgcctgctgctggcggtcgacctg
ccgatcgcgccgaccacgcaggcgcacgtcgagctgcaggcgctggccttcggcctgcag
gacggcccgcggctgggcggcggcgtcggcctcgaatggacgctcacccagtggctgcgt
ctggcgcagcccgatctggccgtgcgggtgttcggcagccaccgccgccaccacgctgcc
gacaccgtgctgcccgccgccaccgcccggctcgacccgtcgggcagcgtgcccggggcc
ggtttcttcatgcccgccggttacgcgctgtacggcgtcggcctgagctcgggggtggcg
ctgcgcgaggccgccagccgcgcctggcggccgtttgccgacctgcgcctgacccgccac
gaccagctcggcgtcggccacggcgccagcctcgggctggccggcagcctgctcggcggc
gaccagctggcactgtcggtcagcctgctgcgcgacggcgccggcggcagcggccgcgag
gccggcctgcgttacgcgctgcggttctga
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