Leptothrix cholodnii: Lcho_0120
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Entry
Lcho_0120 CDS
T00681
Name
(GenBank) intradiol ring-cleavage dioxygenase
KO
K00449
protocatechuate 3,4-dioxygenase, beta subunit [EC:
1.13.11.3
]
Organism
lch
Leptothrix cholodnii
Pathway
lch00362
Benzoate degradation
lch00624
Polycyclic aromatic hydrocarbon degradation
lch01100
Metabolic pathways
lch01120
Microbial metabolism in diverse environments
lch01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
lch00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
Lcho_0120
00624 Polycyclic aromatic hydrocarbon degradation
Lcho_0120
Enzymes [BR:
lch01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.3 protocatechuate 3,4-dioxygenase
Lcho_0120
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Motif
Pfam:
Dioxygenase_C
CarboxypepD_reg
Motif
Other DBs
NCBI-ProteinID:
ACB32395
UniProt:
B1Y648
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All DBs
Position
123915..124490
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AA seq
191 aa
AA seq
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MPALWLGPRAQNTAGLRPTPSQTEGPFYPLQLPADSDFDLLRNGAARASRGEPAWVEGTV
SDLRGRLLEGAVVEIWQCDADGHYHHPGDGGRADPAFQGFGRVTVGADGRYRFRTLRPAP
YSGRTPHIHFKVRHQGHELLTTQLYVQGDPGNERDGLWRRLRDPRDRAALTVPFEPGVDG
LRARFPIVVEA
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
atgccggcgctgtggctgggcccgcgggcccagaacaccgccggcctgcggccgacgccg
agccagaccgaaggcccgttctacccgttgcaactgcccgccgacagcgatttcgacctg
ctgcgcaacggcgcggcgcgcgccagccgcggcgagccggcctgggtcgagggcacggtg
agcgatctgcgcggccggctgctcgaaggcgcggtggtcgagatctggcaatgcgatgcc
gacggccattaccaccaccccggcgacggcggccgcgccgatccggccttccagggcttc
ggccgcgtcacggtcggcgccgacggccgctaccgtttccgcaccctgcgcccggcgccc
tacagcggccgcacgccgcacatccacttcaaggtgcgacaccaaggccacgagctgctg
accacccagctctacgtgcagggcgaccccggcaacgagcgcgacggcctctggcggcgc
ctgcgcgacccgcgcgaccgggctgcgctgacggtgccgttcgagcccggcgtcgacggc
ctgcgggcgcgtttcccgatcgtcgtcgaggcctga
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