Leptothrix cholodnii: Lcho_0129
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Entry
Lcho_0129 CDS
T00681
Name
(GenBank) Diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
lch
Leptothrix cholodnii
Pathway
lch00300
Lysine biosynthesis
lch00470
D-Amino acid metabolism
lch01100
Metabolic pathways
lch01110
Biosynthesis of secondary metabolites
lch01120
Microbial metabolism in diverse environments
lch01230
Biosynthesis of amino acids
Module
lch_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
lch00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Lcho_0129
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Lcho_0129
Enzymes [BR:
lch01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
Lcho_0129
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Gene cluster
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Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
ACB32404
UniProt:
B1Y6S6
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Position
132156..133049
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AA seq
297 aa
AA seq
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MRLHFTKMQGAGNDFVVLDATRAPLALSAADYRFLGDRRFGVGADQILVVERSTTPGVDF
RYRIFNGGSGDEVEQCGNGARCFARFVRDNGLSQQVRVKVETVNSLIELHVEADGRVTVD
MNQPIFEHALIPFDSAGLSARPHNGHGNGFELWPLQLPGASLPSVDVAVLSMGNPHAVQR
VHDVDTAPVAEIGPRVETHARFPRHVNAGFMQVMSRREVRLRVFERGAGETLACGTGACA
AVVAGIRLGWLDPEVDVQTRGGLLTIAWAGLGHPVLMTGPAQTVFTGDIDLPTTSVQ
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgcgattgcacttcaccaagatgcagggcgcgggcaacgacttcgtcgtgctcgacgcc
acccgcgcgccgctggcgctgagcgcagccgactaccggttcctgggcgatcggcgcttc
ggcgtcggcgccgaccagatcctggtggtcgagcgcagcaccaccccgggcgtcgatttc
cggtaccgcatcttcaacggcggcagcggcgacgaggtcgagcagtgcggcaacggcgca
cgctgcttcgcgcgcttcgtgcgcgacaacggcctgagccagcaggtgcgcgtcaaggtc
gagaccgtcaacagcctgatcgagctgcacgtcgaggccgacggccgcgtcaccgtcgac
atgaaccagccgatcttcgagcacgcgctgatcccgttcgactccgccggcctgagtgcg
cggccgcacaacggccacggcaacggcttcgagctgtggccgctgcaactgcccggcgcc
agcctgccgtcggtcgacgtggcggtgctgtcgatgggcaacccgcacgccgtgcagcgc
gtgcacgacgtcgacaccgcgccggtggccgagatcggcccgcgcgtcgagacccatgcg
cgcttcccgcgccacgtcaacgccggtttcatgcaggtgatgtcgcgccgcgaggtgcgc
ctgcgcgtgttcgagcgcggcgccggcgaaacgctcgcctgcggcaccggcgcctgcgcc
gccgtggtggccggcatccggctgggctggctcgaccccgaggtcgacgtgcagacccgc
ggcggcctgctcaccatcgcctgggccggcctgggccacccggtgctgatgaccggtccg
gcacagaccgtcttcaccggcgacatcgacctgccgaccacctcggttcaatga
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