Leptothrix cholodnii: Lcho_0229
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Entry
Lcho_0229 CDS
T00681
Name
(GenBank) DNA topoisomerase III
KO
K03169
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
lch
Leptothrix cholodnii
Brite
KEGG Orthology (KO) [BR:
lch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lch03032
]
Lcho_0229
Enzymes [BR:
lch01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Lcho_0229
DNA replication proteins [BR:
lch03032
]
Prokaryotic type
DNA Topoisomerases
Lcho_0229
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_Crpt
Toprim
Zn_ribbon_PADR1
DUF7351
zf_Rg
Zn_Ribbon_YjdM
Motif
Other DBs
NCBI-ProteinID:
ACB32504
UniProt:
B1Y7Q6
LinkDB
All DBs
Position
243539..246169
Genome browser
AA seq
876 aa
AA seq
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MSKSLVIAEKPSVAQDIVRALTTTSGKFEKHAEHFENDHYVVSSAVGHLVEIRAPEEYDV
KRGKWSFNNLPVVPPHFDLEPIDKSKGRLSALVKLIKRKDVTHLINACDAGREGELIFRL
IEQYALGAKVGTKPVQRLWLQSMTPQAIRDGFEKLRSDAEMRGLAEAARSRSEADWLVGI
NGTRAMTAFNSRDGGFFLTTVGRVQTPTLSIVVEREEKIRKHVSRPYWEVRADFGAAAGL
YEGKWFDPKFKKDDDLERRADRLWSEAEADAIAAAVRGRTGTVREEAKPSTQASPLLYDL
TTLQREANGRFGFSAKTTLSIAQALYEKHKVLTYPRTDARALPEDYVPVAKETLAMIASE
DLPGPLRELAQHARKALDAGYVKPVKRVFDNSKISDHFAIIPTLQAPRSLSEIEAKLYDM
VVKRFIAVFYPSAEFMVTTRITEVPVAQSASQSLPKGVTSPLQFQTNGKVLVNPGWLAVY
GKDAQDEDANLVPVKPGETVQAEELRISPLKTRPPARYNEATLLSAMEGAGKLIDDEELK
AAMQEKGLGTPATRAQVIEGLILEKYMLREGRDLIATAKAFQLMTLLRGLAIEDLTKPEL
TGQWEYQLSQMEKGQLSRDAFMHGIADMAQRIVKKAKEYDRDTIPGDYATLKAPCPNCGG
VVKENYRRFACVGRDANGSSGAEGSGCGFSISKIPGSRSFELHEAEAFLRDHKIGPLEGF
RSKAGWPFTAELKLVRDDEINNWKLEFDFGEDAKKDDESGEPVDFSAQTSLGSCPKCKGH
VYEHGTSYVCEHAVGAPQTCDFKTGKIILQQPVTHEQMNKLLIEGKTALLDGFVSNKTKR
KFKAFLVFDKKEGKVVFEFEPRAARVPAKKAAAKAS
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagtcactggtcatcgccgaaaagccgtccgtcgcgcaggacatcgtgcgtgcg
ttgacgacgacgtcgggcaagttcgagaaacacgccgaacatttcgagaacgaccactac
gtcgtctcgtcggcggtcggccacctggtcgagatccgcgcgcccgaggaatacgacgtc
aagcgcggcaaatggagcttcaacaacctgccggtggtgccgccgcacttcgatctggag
ccgatcgacaagagcaaggggcggctcagtgcgctggtcaagctgatcaagcgcaaggac
gtcacccatctcatcaacgcctgcgacgccgggcgcgagggcgagctgatcttccgcctg
atcgagcagtacgcgctgggcgccaaggtcggcaccaagccggtgcagcgcctgtggctg
cagagcatgacgccgcaggcgatccgcgacggcttcgagaagctgcgctcggacgccgag
atgcgcggcctggccgaagccgcgcgcagccgcagcgaggccgactggctggtcggcatc
aacggcacgcgggcgatgacggccttcaactcgcgcgacggcggcttctttctcaccacc
gtcgggcgggtgcagacgcccacgctgtcgatcgtggtcgagcgcgaggagaagatccgc
aagcacgtctcgcggccgtactgggaggtgcgggccgacttcggcgccgccgccggcttg
tacgagggcaagtggttcgaccccaagttcaagaaggacgacgacctcgagcgccgcgcc
gaccggctctggagcgaggccgaggccgacgccatcgccgccgcggtgcgcggccggacc
ggcacggtgcgcgaggaggccaagcccagcacccaggccagcccgctgctctacgacctg
acgacgctgcagcgcgaggccaacggccgcttcggcttctcggccaagacgacgctgtcg
atcgcccaggcgctgtacgaaaaacacaaggtgctgacctatccgcggaccgacgcccgt
gcgctgcccgaggactacgtgccggtggccaaggagacgctggcgatgatcgccagcgag
gacctgcccggccccctgcgcgagctggcccagcatgcccgcaaggcgctcgatgccggc
tacgtcaagccggtcaagcgggtgttcgacaacagcaagatctcggaccacttcgccatc
atcccgaccctgcaggcgccgcgcagcctgagcgagatcgaggccaagctctacgacatg
gtggtcaagcgcttcatcgcggtgttctacccgtcggccgaattcatggtcacgacccgc
atcaccgaggtgccggtggctcagtcggcgagccagtcgctgcccaagggggtgacctcg
ccgctgcagttccagaccaacggcaaggtgctggtcaacccgggctggctggcggtctac
ggcaaggacgcgcaggacgaggacgccaacctggtgccggtcaagcccggcgagacggtg
caggctgaggagctgcgcatctcgccgctcaagacccggccgcccgcgcgctacaacgag
gccacgctgctgagcgcgatggaaggcgccggcaagctgatcgacgacgaggagctcaag
gccgcgatgcaggagaagggcctgggcacgccggccacccgcgcgcaggtgatcgaaggc
ctgatcctcgagaaatacatgctgcgcgagggccgcgacctgatcgccaccgccaaggcc
ttccagctcatgacgctgctgcgcggcctggcgatcgaggacctgaccaagcccgagctg
accggccagtgggaataccagctcagccagatggagaagggccagctcagccgcgatgcc
ttcatgcacggcatcgccgacatggcgcagcgcatcgtcaagaaggccaaggaatacgac
cgcgacaccatccccggcgactacgcgacgctgaaggcgccctgcccgaactgcggcggc
gtggtcaaggagaactaccgccgcttcgcctgcgtcggccgtgacgccaacggcagcagc
ggcgccgagggcagcggctgcggcttctcgatcagcaagatcccgggctcgcgcagcttc
gagctgcacgaggccgaggccttcctgcgcgaccacaagatcggcccgctggagggcttc
cgctccaaggccggctggccgttcacggccgagctcaagctggtgcgcgacgacgagatc
aacaactggaagctcgagttcgacttcggcgaggacgccaagaaggacgacgagtccggc
gagccggtcgacttcagcgcccagaccagcctcggcagctgcccgaagtgcaagggccac
gtctacgaacacggcaccagctacgtctgcgagcacgcggtgggcgcgccccagacctgc
gacttcaagaccggcaagatcatcctgcagcagcccgtcacgcacgagcagatgaacaag
ctgctgatcgaaggcaagaccgcgctgctcgacggcttcgtctccaacaagaccaagcgc
aagttcaaggccttcctggtgttcgacaagaaggagggcaaggtggtgttcgagttcgag
ccgcgtgcggcgcgggtgccggccaagaaggcggccgcgaaggcctcatga
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