Leptothrix cholodnii: Lcho_0301
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Entry
Lcho_0301 CDS
T00681
Name
(GenBank) polysaccharide biosynthesis protein CapD
Organism
lch
Leptothrix cholodnii
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Ortholog
Paralog
GFIT
Motif
Pfam:
Polysacc_synt_2
Epimerase
RmlD_sub_bind
CoA_binding_3
GDP_Man_Dehyd
3Beta_HSD
adh_short
NAD_binding_10
adh_short_C2
KR
NAD_binding_4
PNTB
Motif
Other DBs
NCBI-ProteinID:
ACB32576
UniProt:
B1XW49
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Position
317981..319852
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AA seq
623 aa
AA seq
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MIWQSLDSILTRIRPRREVLALAIDALVVAACWHITYLFRLGFERWHSARPDYDVWVMLA
LVALYLGVFVALRVPKGMWRFSGFGEVQRLTLACAIAGLVGAVAVLMAQLSQVPRAVLAL
HPVVSLMGLAMVRIGYRMLYEHMRGRISGSATETRRALVMGAGDAARLLIAGIQHHGWVV
VGLLDDDRRRLGTRVSNVPVLGPLDSAPRWAELHGISHIIVALPSATPAERRRALDLAAA
THLPVVTVPSAAELREGTTVTRVREIEAEDLLGREPVQLDEGGISEALGGKVVLITGAGG
SIGSELCRQVARYGPLKLVLYELSEFALYRIEQELSEHFPHIPLVRLVGDVRDPEHLRAT
FTRVRPQVVFHAAAYKHVPLMEEDNAFAALRNNTLGTWRAASAAAEAGAERFVLISTDKA
VNPTNVMGASKRAAEMVIAKLAAEVLARGGRTRFMAVRFGNVLGSSGSVIPKFKEQIARG
GPVTVTHPDITRFFMTIPEAARLVVQAAAIGEGGQVFVLDMGEPVRIVDLARDLIRMSGH
SADEIPITFSGLRPGEKLYEELLADADATLATRFERLRIARLDDRGHDVQALLDWAAERS
SAPDDEVRERLARLVSEYRRAGH
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgatctggcaatcgctcgacagcatcctcacccgcatccgcccgcgccgcgaagtgctc
gcgctggcgatcgacgcgctggtggtggcggcctgctggcacatcacctacctgttccgg
ctcggcttcgagcgctggcacagcgcccggccggattacgacgtctgggtcatgctggcg
ctggtggcgctgtatctgggcgtgttcgtcgccttgcgcgtgcccaagggcatgtggcgc
ttctcgggtttcggcgaggtgcagcggctcacgttggcgtgtgcgatcgccgggctggtc
ggcgcggtggccgtgctgatggcgcagctgtcgcaggtgccgcgcgcggtgctggcgctg
cacccggtcgtcagcctgatggggctggcgatggtgcgcatcggctaccgcatgttgtac
gaacacatgcgtgggcgcatctccggcagcgccaccgaaacccgccgcgcgctggtgatg
ggcgcgggcgacgcggcgcggctcttgatcgccggcatccagcaccacggctgggtggtg
gtcggcctgctcgacgacgatcggcggcgcctgggcacacgcgtcagcaacgtgccggtg
ctcgggccgctggacagtgcgccgcgctgggccgagctgcacggcatcagccacatcatc
gtcgcgctgccgtcggccacgccggccgaacgccgccgcgcgctcgacctggccgccgcc
acccatctgccggtggtgacggtgcccagcgccgccgagctgcgcgagggaaccacggtg
acgcgggtgcgcgagatcgaggccgaagacctgctcggccgcgagccggtgcagctcgac
gaaggcggcatcagcgaggcgctgggtggcaaggtggtgctgatcaccggcgcgggcggt
tcgatcggctcggagctgtgccgccaggtggcgcgttacggcccgctcaagctggtgctc
tacgagctgagcgagttcgcgctctaccgcatcgagcaggagctgagcgagcacttcccg
catatcccgctggtgcggctggtgggcgacgtgcgcgacccggagcacctgcgcgccacc
ttcacacgcgtgcgcccgcaggtggtgttccacgccgcggcctacaagcacgtgccgctg
atggaggaggacaacgccttcgccgccttgcgcaacaacacgctcggcacctggcgcgca
gccagcgcggcggccgaggcgggcgccgaacgtttcgtgctgatctcgaccgacaaggcc
gtcaacccgaccaacgtgatgggcgcgagcaaacgcgcggccgagatggtgatcgccaag
ctcgcggccgaggtgctggcgcgcggcgggcgcacgcgtttcatggcggtgcgttttggc
aatgtgctgggttcgtcgggcagcgtgatcccgaagttcaaggagcagatcgcccgcggc
gggccggtgacggtgacacaccccgacatcacgcgcttcttcatgaccatccccgaggct
gcgcgactggtggtgcaggccgcggcgatcggcgagggcggtcaggtgttcgtgctcgac
atgggcgagccggtgcgcatcgtcgacctggcgcgcgacctgatccgcatgagcggccat
tcggccgacgagatcccgatcaccttcagcggcctgcgcccgggcgaaaagctctacgaa
gaactgctggccgacgccgacgcgacgcttgcgacgcgcttcgagcgcctgcgcatcgcc
cgcctcgacgaccgcggccacgacgtgcaggcattgctcgactgggccgccgagcgcagc
agcgcgcccgacgacgaagtgcgcgaacggctggcgcggctggtgtcggaataccgccgc
gccgggcattga
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