Leptothrix cholodnii: Lcho_0342
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Entry
Lcho_0342 CDS
T00681
Name
(GenBank) diguanylate cyclase/phosphodiesterase
Organism
lch
Leptothrix cholodnii
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Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
Motif
Other DBs
NCBI-ProteinID:
ACB32617
UniProt:
B1XW90
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Position
complement(374197..376251)
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AA seq
684 aa
AA seq
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MPAKTDTPLPRHTAEPTVPMLGARTPRTSPARVLLQVGARLRGPLASALFARGMQPVLGH
AGQRGLALEIREFGPPVSGEPPTRPGATPVAPALLALLPGAARSDGIDWRHEALRAGALS
LLVLDDTAADIETMARLAARLTRLTRQPVQLPPGAAAQRPAPATHGHTTPGHASPERAPT
SSRSLHGGSAARPAPELIAAIDEAVGQARQLGAMGALLLVGLNRLAEIDTALGTAIRRDM
VDAIETRLTDVLRQEADRHRLRPAAELYRWDGGFAIVWPQISHGEQALQLARQLLKQAGE
PLTVAGEEASLSANAGIGLLPHDGVEATALLEAAERALHHARSRGPGQCQFHEQDLAPRQ
RERLRLEARLRRAIADGSFELHYQPQVDLQTGALTGAEALLRWPDGAGGSVPPSLFIPMA
EANGLIVALGDWVLQRVCRQIRRWLDRGLEVPRIAINVTPQELQQPDFVARVLRSLADAG
LAGRHLCIELTEAALMTDTAAARAATATLSTRLLMLREAGVQLAIDDFGTGCSSLAMLRR
LPMDGLKIDRSFVADVDGDGAAICAAIIGLAHTLGLRVIAEGIETDAQLAFLREQGCDEF
QGHVLSPALGATIMGEVLAGAAIQYRVPPAPALPTAPADPAAPSMPELAQLHRSLARRPR
QESGAALQWPAPLQAGEPTFTAPT
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgcctgccaagacggatacgcccctcccccgccacaccgccgagccgaccgtcccgatg
ctcggtgcacgcacgcccaggaccagcccggcacgggtcctgctgcaggtgggcgcgcgc
ctgcgcgggcccctggcgagcgcgctgttcgcccgcggcatgcaaccggtgctcggccac
gccggccagcgcggcctggcgctcgagatccgcgagttcggcccgcccgtgtccggcgag
ccgcccacccggcccggtgcgacaccggtcgcccccgcgctgctcgcgctgctgcccggc
gcagcccgcagcgacggcatcgactggcgccacgaggccctgcgggccggcgcgctgtcg
ctgctggtgctcgacgacacggccgccgacatcgagacgatggcccgcctggcggcccgg
ctgacgcggctgacccggcagccggtgcagctgccgcccggggccgctgcgcagcggccg
gcccccgcgacacacggacacacgacacccggacacgcctcccccgaacgcgcgccgacg
agcagtcgcagcctgcacggcggcagcgcggcccggccggcgcccgagctgatcgccgcc
atcgacgaggccgtcggccaggcgcgccagctcggcgcgatgggcgcgctgctgctcgtc
ggcctgaaccgcctggccgagatcgacaccgcgctcggcaccgcgatccgccgcgacatg
gtcgacgcgatcgagacgcggctgaccgacgtgctgcgccaggaggccgaccgccaccgg
ctgcgcccggccgccgagctgtaccgctgggacggcggcttcgcgatcgtctggccgcag
atctcgcacggcgagcaggccctgcagctggcgcgccagctgctgaagcaggccggcgag
ccgctcacggtggccggcgaagaagccagcctgagcgccaacgccggcatcggcctgctg
ccgcacgacggcgtcgaagccaccgcgctgctcgaggcggccgaacgggcgctgcaccac
gcacgcagccgcggccccggccagtgccagttccacgagcaggacctcgccccgcgccag
cgcgagcgcctgcggctcgaggcgcgcctgcgccgcgccatcgccgacggcagcttcgag
ctgcactaccagccgcaggtcgacctgcagaccggcgcgctgaccggcgccgaagcgctg
ctgcgctggcccgacggcgccggcggcagcgtgccgccgagcctgttcatcccgatggcc
gaagccaacggcctgatcgtcgcgctgggcgactgggtgctgcagcgggtctgccggcag
atccgccgctggctcgaccgcgggctcgaggtgccgcgcatcgccatcaacgtcacgccg
caggagctgcagcagcccgacttcgtggcgcgcgtgctgcgctcgctggccgacgccggg
ctggccggtcgccacctctgcatcgagctgaccgaagccgcgctgatgaccgacaccgcc
gccgcccgcgccgccaccgccacgctgagcacgcgcctgctgatgctgcgcgaggccggc
gtgcagctggcgatcgacgacttcggcaccggctgctcgtcgctggcgatgctgcggcgc
ctgccgatggacggcctgaagatcgaccgctccttcgtggccgacgtcgacggcgacggc
gcggcgatctgcgcggccatcatcggcctggcccacacgctgggcctgcgggtgatcgcc
gaaggcatcgagaccgatgcccagctggccttcctgcgcgagcagggctgcgacgagttc
cagggccatgtgctgtcgccggcactcggcgccaccatcatgggcgaggtgctggccggc
gcggcgatccagtaccgcgtgccgccggcgccggccctgccgaccgccccggccgacccc
gccgcgccgtcgatgcccgaactggcccagctgcaccgcagcctggcgcgccggccccgg
caggaaagcggcgcggcgctgcaatggccggcgccgcttcaggccggcgaaccgacgttc
actgcgccaacttga
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