KEGG   Leptothrix cholodnii: Lcho_0376
Entry
Lcho_0376         CDS       T00681                                 
Name
(GenBank) signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
lch  Leptothrix cholodnii
Pathway
lch02024  Quorum sensing
lch03060  Protein export
lch03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:lch00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    Lcho_0376
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Lcho_0376
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Lcho_0376
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:lch02044]
    Lcho_0376
Enzymes [BR:lch01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     Lcho_0376
Secretion system [BR:lch02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   Lcho_0376
  Eukaryotic Sec-SRP protein
   Lcho_0376
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N Zeta_toxin CbiA AAA_22 AAA_16 AAA_26 AAA_33 cobW APS_kinase AAA_30 AAA_31 AAA_24 AAA_19 AAA_18 AAA_14 ABC_tran YqeC Thymidylate_kin Helicase_RecD nSTAND3 CarD_C ParA TsaE ResIII DUF2810 ArsA_ATPase DO-GTPase1 KTI12 Rad17 SLFN-g3_helicase GTP_EFTU Ribosomal_L36e
Other DBs
NCBI-ProteinID: ACB32651
UniProt: B1XX05
LinkDB
Position
complement(410901..412268)
AA seq 455 aa
MASALSDRLSKLVKTMRGQARITESNVQDMLREVRMALLEADVALPVVRDFIARVKEKAL
GQEVAGSLNPGQALVGIVHKELAATMGEGVSDINLTVQPPAVILMAGLQGAGKTTTTAKL
AKHLIERRKKKVLTVSADVYRPAAIEQLKTVTRQAGAEWFPSQGDQKPRDIALAAIDYAR
KHHFDVLLVDTAGRLAIDEALMAEIKDLHATLTPIETLFVVDAMQGQDAINTARAFKEAL
PLTGIVLTKLDGDSRGGAALSVRSITGAPIKFAGVSEKIDGLEVFDADRHAGRVLGMGDI
VALVEEVQKGVDMQSAQKLADKIKSGDAFDLNDFLSQLSQMKKMGGLSSLLEKLPAEMAA
KAGQADMGKAEKDVRRMEGMINSMTPLERRKPDLIKASRKRRIAAGAGVQVQEVNRMLNQ
FEQMRDMMKKMKGGGLMKMMKRFGGAKRGFPGMGR
NT seq 1368 nt   +upstreamnt  +downstreamnt
atggcatccgccctttccgatcgcctgtccaaactagtcaagacgatgcgcggccaggcg
cgcatcaccgaatccaacgtgcaggacatgctgcgcgaagtgcgcatggccctgctcgag
gccgacgtcgccctgccggtggtgcgcgacttcatcgcccgcgtcaaggagaaggcactc
ggccaggaggtcgccggctcgctcaacccgggtcaggcgctggtcggcatcgtgcacaag
gagctcgccgccaccatgggcgagggggtgtccgacatcaacctcacggtgcagccgccg
gcggtgatcctgatggccggcctgcagggcgcgggcaagaccaccaccaccgccaagctg
gccaagcacctgatcgagcgacgcaagaagaaggtgctgacggtctcggccgacgtctac
cgcccggccgccatcgagcagctcaagacggtgacgaggcaggccggcgccgagtggttc
ccgagccagggcgaccagaagccgcgcgacatcgcgctggccgcgatcgactacgcccgc
aagcaccacttcgacgtgctgctggtcgacaccgccggccgactggcgatcgacgaagcg
ctgatggccgagatcaaggacctgcacgccacgctcaccccgatcgagacgctgttcgtg
gtcgacgcgatgcagggccaggacgccatcaacaccgcccgcgccttcaaggaggcgctg
ccgctgaccggcatcgtgctgaccaagctcgacggcgactcgcggggtggcgcggcgctg
tcggtgcgcagcatcaccggcgcgccgatcaagttcgccggcgtgtccgagaagatcgac
ggcctggaggtcttcgacgccgaccgccacgccggccgcgtgctcggcatgggcgacatc
gtggcgctggtcgaggaggtacagaagggcgtggacatgcagtccgcgcagaaactggcc
gacaagatcaagagcggcgatgccttcgacctgaacgacttcctgtcgcagctcagccag
atgaagaagatgggcgggctgtcgagcctgctcgagaagctgccggccgagatggccgcc
aaggccggccaggccgacatgggcaaggccgagaaggacgtgcgccggatggagggcatg
atcaattcgatgacgccgctcgaacgccgcaagcccgacctgatcaaggccagccgcaag
cgccgcatcgccgccggtgccggcgtgcaggtgcaggaagtcaaccgcatgctcaaccag
ttcgagcagatgcgcgacatgatgaagaagatgaagggcggtggcctgatgaagatgatg
aagcgcttcggcggtgccaagcgcggcttccccggcatgggccggtga

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