Leptothrix cholodnii: Lcho_0490
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Entry
Lcho_0490 CDS
T00681
Name
(GenBank) putative transcriptional regulator
KO
K03655
ATP-dependent DNA helicase RecG [EC:
5.6.2.4
]
Organism
lch
Leptothrix cholodnii
Pathway
lch03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lch00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Lcho_0490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lch03400
]
Lcho_0490
Enzymes [BR:
lch01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Lcho_0490
DNA repair and recombination proteins [BR:
lch03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Lcho_0490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLFN_AlbA_2
HATPase_c_4
HTH_24
HTH_AsnC-type
HTH_11
AbiEi_4
HTH_IclR
MarR_2
Motif
Other DBs
NCBI-ProteinID:
ACB32765
UniProt:
B1XXZ6
LinkDB
All DBs
Position
531100..532614
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AA seq
504 aa
AA seq
DB search
MTEGAKKLDLRSLGDLSQLVETVTLECKLAQGEDGQGALPKDFWPTYSAMANSHGGLLLL
GVRERHGRFSVAGVPDADKVRRDLFNNLNNPGKVSANLLGEDDVQALMLEGRTVLAVQIP
QAPRKLRPIYLNGQPLGHTWRRLHDGDRLCDVETVKRMLAEQLEDSRDTRLLNRFGLPDL
DPESLRAYRQMFAVVRPDHPWNAPDDTAFLKLIGGWRDDRDSGDSGLTLAGLLMFGQWPS
ISEAAPLYFVDYQEQTDASDAATRWLDRLVPDGTWSGNLFDFYRRVIRKLGADLKVPFML
KGDTRIDDTPQHQALREALVNTLVHADYNDRASVRIVKRPSGFEFRNPGALRIPAEQALH
GGVSDCRNRTLQQMFLMLNLGERAGSGLPRIRAGWDGDGRTLTLHDDFEPYDHTVLTMSW
GSSRAAIRRAQVETPGKTPGKTPGKTPDLVLHALQADPQATVPTLALQLGKSESAILRVI
RKLREEGRLRRIGPDKGGHWEVAV
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgaaggcgccaagaaactcgacctccgctcgctcggcgacctctcgcaactcgtc
gagacggtcacgctggaatgcaagctcgcgcagggcgaggacgggcagggcgccctgccc
aaggacttctggccgacctactcggcgatggcgaacagccacggcgggttgctgctgctg
ggtgtgcgtgagcgccatggccggttcagcgtggccggtgtgcccgatgcggacaaggtg
cggcgcgacctgttcaacaacctcaacaatccgggcaaggtcagcgccaatctgctcggt
gaagacgatgtgcaggcgctgatgctggagggccggacggtactggccgtgcagatcccg
caggcgccgcgcaagctgcggccgatctatctgaacggccagccgctgggccacacctgg
cgccggctgcacgacggcgaccggctctgcgatgtcgagaccgtcaagcgcatgctggcc
gaacagctcgaagacagccgcgacacccgcctgctgaaccgcttcggcctgccggatctg
gatcctgaaagcctgcgcgcttaccgtcagatgttcgcggtcgtgcggcccgatcacccc
tggaacgcacccgacgacaccgccttcctgaagttgatcggcggctggcgtgacgaccgc
gacagcggcgatagcggcctgaccctggccgggctgctgatgttcggccagtggcccagc
atcagcgaggccgccccgctgtacttcgtcgattaccaggaacagaccgacgcctctgac
gcggccacgcgctggctcgaccggctggttcccgatggcacctggtctggcaacctgttc
gacttctatcgccgcgtgatccgaaagctcggtgccgacctgaaggtgccgttcatgctc
aagggcgacacgcgcatcgacgacacgccccagcaccaggcgctgcgcgaggcgctggtc
aacacgctggtgcatgccgactacaacgatcgggcttcggtgcgcatcgtcaagcggccg
tccggtttcgagttccgcaacccgggtgcgctgcgcattccggccgagcaggcgctgcac
ggcggggtgagcgactgccgcaaccgcaccctccagcagatgttcctgatgctcaacctg
ggcgagcgcgcaggctccggcctgccgcgtatccgcgctggctgggacggcgacggccgc
acgttgacgttgcacgacgatttcgagccctacgaccacaccgtgctgacgatgagttgg
gggtcatcgagggcagcgattcgccgggcgcaggttgaaacgccagggaaaacgccaggg
aaaacgccagggaaaacgccagatctggttttgcacgccctccaagccgacccacaggcc
acggtgccgacgcttgcgctgcaactgggcaaatccgaaagcgccatcctgcgtgtgatc
cgcaagctgcgcgaagagggccgcctgcgccgcatcggccctgacaagggcggccactgg
gaggtggcggtgtga
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