Leptothrix cholodnii: Lcho_0501
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Entry
Lcho_0501 CDS
T00681
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
lch
Leptothrix cholodnii
Pathway
lch00550
Peptidoglycan biosynthesis
lch01100
Metabolic pathways
lch01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
lch00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Lcho_0501
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Lcho_0501
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
lch01011
]
Lcho_0501
Enzymes [BR:
lch01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
Lcho_0501
Peptidoglycan biosynthesis and degradation proteins [BR:
lch01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
Lcho_0501
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
bDLD3
DUF7261
Motif
Other DBs
NCBI-ProteinID:
ACB32776
UniProt:
B1XY07
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All DBs
Position
complement(542802..544841)
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AA seq
679 aa
AA seq
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MIELRNVEQELERYRTRLIVAAVFVLACFGLLAARLVYLQVVVHEDLATRAENNRIAVVP
IVPNRGLIVDRNGVVLADNYSAYTLEITRSQLTESLESTIDQLAEVVEIQPRDRRRFKRL
LEDSRSFESLPIRTKLSDAEVARFTAQRYRFPGVEIKARLFRNYPYGELASHLLGYIGRI
NRNELAAMEEWPEEDWANYRGTEVIGKLGIEQKYERELHGTTGVEEVETSAGGRPVRRLR
SEPASPGSSVHLSIDIKLQALIERLFGERRGALVAIDPRNGEVLAFVSKPTFDPNLFVDG
IDHESWKELNESIDKPLLNRALKGTYPPGSTYKPFMAMAALTTGKRSATQVINDNGSFMF
GNHRFRSHGDGGLGSVDMVKSIVLSSNVYYYSLANEMGVDLIHDQLYPYGFGRRTGIDLD
GESTGDLPSTAWKRSKYKRPDLQRWYAGETISLGIGQGYNNFTMLQMASAMATLVSGGKR
FEPRLVREIEDVLTHDRQRPSAQALEPLDLKPEHVAVIRRAMHGVTQEGTSTRVFAGAAY
PSGGKTGTAQAKSIGQKEKYNAAKLAEYFRDHSLYTAFAPVDEPRVALAVVVENSGFGAE
AAAPIARRVLDYLLLGLYPSEEDIALARLGKAGAPVGPQRLAADVPLPTLMSAGMATPTD
AAASAPAPASAPILLGGPR
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgatcgagctgcgcaatgtcgaacaggagctggagcgctaccgcacccgcctgatcgtg
gccgcggtcttcgtgctggcctgcttcgggctgctggccgcccggctggtgtacctgcag
gtggtggtccacgaagacctcgccacccgggccgagaacaaccgcatcgcggtggtgccg
atcgtgcccaaccgcggcctgatcgtcgaccgcaacggcgtcgtgctggccgacaactac
tcggcctacacgctcgagatcacgcgctcgcagctcaccgagtcgctcgaatcgacgatc
gaccagctcgccgaggtggtcgagatccagccgcgcgaccgacgccgcttcaagcgcctg
ctcgaggactcgcgcagcttcgaatcgctgccgatccgcaccaagctcagcgacgccgag
gtggcccgcttcacggcccagcgctaccgttttccgggcgtcgagatcaaggcgcggctg
ttccgcaactacccctatggcgaactcgccagccacctgctcggctacatcggccgcatc
aaccgcaacgagctggccgcgatggaggagtggccggaggaagactgggccaactaccgc
ggcaccgaggtgatcggcaagctcggcatcgagcagaaatacgagcgcgagctgcacggc
accaccggcgtcgaggaggtcgagaccagcgccggcgggcggccggtgcggcgcctgcgc
tccgagccggcctcgccgggcagcagcgtgcacctgagcatcgacatcaagctgcaggcc
ctgatcgagcgtctgttcggcgagcgtcgcggcgcgctggtggcgatcgacccgcgcaac
ggcgaggtgctggccttcgtcagcaagccgaccttcgaccccaacctgttcgtcgacggc
atcgaccacgagagctggaaggagctcaacgaatcgatcgacaagccgctgctcaaccgc
gcgctcaagggcacctacccgccgggctcgacctacaagccgttcatggcgatggccgcg
ctgaccaccggcaagcgcagcgccacccaggtgatcaacgacaacggctcgttcatgttc
ggcaaccaccgcttccgcagccacggcgacggcgggctggggtcggtcgacatggtcaag
tcgatcgtgctgtcgagcaacgtctactactactcgctggccaacgagatgggtgtcgac
ctgatccacgaccagctctacccctacggcttcggccggcgcaccggcatcgatctcgac
ggcgagagcaccggcgacctgccctcgaccgcctggaaacgcagcaagtacaagcgcccc
gacctgcagcgctggtacgccggcgagaccatctcgctgggcatcggccagggctacaac
aacttcaccatgctgcagatggccagcgcgatggccacgctggtgtcgggcggcaagcgc
ttcgagccgcggctggtgcgcgagatcgaggacgtgctgacccacgaccgccaacgtccg
agcgcccaggccctcgagccgctcgacctcaagcccgagcacgtcgcggtgatccgccgc
gccatgcacggcgtgacgcaggagggcacctcgacgcgggtgttcgccggcgccgcctac
ccgagcggcggcaagaccggcaccgcccaggccaagagcatcggccagaaggaaaagtac
aacgccgccaagctggccgaatacttccgcgaccactcgctctacaccgccttcgcgccg
gtcgacgagccgcgcgtggccctggcggtggtggtcgagaactccggcttcggcgccgag
gcggccgcgccgatcgcacgccgcgtgctcgactacctgctgctcggtctctatcccagc
gaggaggacatcgcgctcgcccggctgggcaaggccggtgcaccggtcggcccgcagcgg
ctggccgccgacgtgccgctgccgaccctgatgagcgcgggcatggcgacgccgaccgat
gccgccgcgtccgcacccgcaccggccagtgcgccgattcttctcggcggcccccgatga
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