Leptothrix cholodnii: Lcho_0531
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Entry
Lcho_0531 CDS
T00681
Name
(GenBank) crossover junction endodeoxyribonuclease RuvC
KO
K01159
crossover junction endodeoxyribonuclease RuvC [EC:
3.1.21.10
]
Organism
lch
Leptothrix cholodnii
Pathway
lch03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lch00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Lcho_0531
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lch03400
]
Lcho_0531
Enzymes [BR:
lch01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.10 crossover junction endodeoxyribonuclease
Lcho_0531
DNA repair and recombination proteins [BR:
lch03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Lcho_0531
RecFOR pathway proteins
Lcho_0531
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvC
DUF460
Motif
Other DBs
NCBI-ProteinID:
ACB32806
UniProt:
B1XYS2
LinkDB
All DBs
Position
complement(578838..579389)
Genome browser
AA seq
183 aa
AA seq
DB search
MTRILGIDPGLATTGFGVIDVEGQALRYVASGTVHTREADIGDLPGRIKLIFEGVREVMA
TYQPTCASIEIVFVNVNPQSTLLLGQARGAALAALVTGGLAVTEYTALQMKKAVVGSGHA
RKEQVQEMVMRLLQLPGRPNQDASDALGLAITHAHAGGSFAAIEQATTLQRRQHAHYRGG
RIF
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atgacccgcatcctcggcatcgaccccggcctggcgaccaccggcttcggcgtgatcgac
gtcgagggccaggcgctgcgttacgtcgccagcggcacggtgcacacccgcgaggccgac
atcggcgatctgccggggcgcatcaagctgatcttcgagggcgtgcgcgaggtgatggcg
acctaccagccgacgtgtgcgtcgatcgagatcgtgttcgtcaacgtcaacccgcagagc
acgctgctgctcggccaggcgcgcggggcggcgctggcggcgctggtgacgggcgggctg
gcagtgaccgaatacaccgcgctgcagatgaagaaggccgtggtcggcagcggccacgcg
cgcaaggagcaggtgcaggagatggtgatgcggctgctgcagctgcccggtcggccgaac
caggacgcctccgatgcgctcggcctggcgatcacgcatgcccatgccggcggctcgttc
gcggccatcgagcaggccaccacgctgcagcgccggcagcacgcccactaccggggcggc
cggatcttttga
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