Leptothrix cholodnii: Lcho_0542
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Entry
Lcho_0542 CDS
T00681
Name
(GenBank) transcriptional regulator, TetR family
KO
K05501
TetR/AcrR family transcriptional regulator
Organism
lch
Leptothrix cholodnii
Brite
KEGG Orthology (KO) [BR:
lch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lch03000
]
Lcho_0542
03036 Chromosome and associated proteins [BR:
lch03036
]
Lcho_0542
Transcription factors [BR:
lch03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
Lcho_0542
Chromosome and associated proteins [BR:
lch03036
]
Prokaryotic type
Chromosome partitioning proteins
Inhibitors of FtsZ assembly
Lcho_0542
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SlmA-like_C
TetR_N
TetR_C_6
HTH_11
fvmX1
HTH_20
TetR_C_25
PEP-utilisers_N
RasGEF_N
Motif
Other DBs
NCBI-ProteinID:
ACB32817
UniProt:
B1XYT3
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Position
589373..590017
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AA seq
214 aa
AA seq
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MTEHVSEATVPEPDTAVLAPVRKRPKPGERRVQILQTLAHMLEQPGAERITTAALAAQLE
VSEAALYRHFASKAQMFEGLIEFIETSVFTLINQISERETDPQVQASRCLTVLLQFAEKN
PGMTRVMVGDALVFENDRLLSRMNQFFERIESQLRQSLRALAELRGSVTPSVDATAQASV
LTSFAVGRLQRYARSGFRRSPTEHLDAALHLLLA
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgaccgagcacgtctccgaagccaccgtccccgagccggacaccgccgtgctggccccc
gtgcgcaagcgccccaaacccggcgaacgccgcgtccagatcctgcagacgctcgcgcac
atgctcgagcagcccggcgccgagcgcatcaccaccgccgcgctggccgcgcagctcgag
gtcagcgaagccgcgctctatcgccacttcgccagcaaggcgcagatgttcgagggcctg
atcgagttcatcgagaccagcgtcttcaccctgatcaaccagatcagcgagcgcgagacc
gatccgcaggtccaggcctcgcgctgcctgaccgtgctgctgcagttcgccgagaagaac
cccggcatgacgcgcgtgatggtgggcgacgcgctggtgttcgagaacgaccgcctgctg
tcgcgcatgaaccagttcttcgagcgcatcgagtcgcagctgcgccagagcctgcgtgcg
ctggccgagctgcgcggctcggtcacgccgagcgtcgacgccaccgcgcaggcctcggtg
ctgaccagctttgcggtcgggcggctgcagcgttatgcgcgctcgggttttcgccgcagc
cccaccgaacacctcgacgccgcgctgcacctgctgctcgcctga
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