Leptothrix cholodnii: Lcho_0573
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Entry
Lcho_0573 CDS
T00681
Name
(GenBank) NUDIX hydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
lch
Leptothrix cholodnii
Pathway
lch03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lch00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Lcho_0573
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lch03019
]
Lcho_0573
Messenger RNA biogenesis [BR:
lch03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Lcho_0573
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
Motif
Other DBs
NCBI-ProteinID:
ACB32848
UniProt:
B1XYW4
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All DBs
Position
complement(622738..623349)
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AA seq
203 aa
AA seq
DB search
MLDREGFRPNVGIILLNQRSEVFWGKRIRTHSWQFPQGGIKHGESPEQAMFRELHEEVGL
FPDHVRIIARTRDWLRYEVPDHFIRRDARGHYKGQKQIWFLLQLTGRDSDMNLRATDHPE
FDAWRWHDYWVPLEVVIEFKRNVYQMALTELARYVPRPNHHNRYLRSGMRAHRRDEGSEH
NDHLDPTGPHDAGASVSEPKQAE
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaccgtgaaggcttccggcccaacgtcggcatcatcctgctcaaccagcggagc
gaggtgttctggggcaaacgcatccggacgcactcctggcagtttccgcagggcggcatc
aaacatggtgaatcgccagagcaggcgatgtttcgcgagctccacgaagaagtgggcttg
ttccccgatcacgttcgcatcattgcgcgcacccgcgactggctgcgttacgaggtaccc
gaccacttcatacgccgcgacgcacgcggccactacaagggccagaagcagatctggttc
ctgctgcagctcaccggtcgtgactccgacatgaacctgcgcgccaccgatcaccccgag
ttcgacgcctggcgctggcacgactactgggtaccgctggaagtggtgatcgagttcaag
cgcaacgtctatcagatggcgttgaccgaactcgcgcgctacgtgccgcggcccaaccac
cacaaccgctacctgcgcagcggcatgcgggcgcaccggcgcgacgagggcagcgagcac
aacgaccacctcgacccgaccggcccgcacgatgccggggcttccgtttcggagcccaag
caggccgaatag
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