Leptothrix cholodnii: Lcho_0584
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Entry
Lcho_0584 CDS
T00681
Name
(GenBank) tRNA-i(6)A37 thiotransferase enzyme MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
lch
Leptothrix cholodnii
Brite
KEGG Orthology (KO) [BR:
lch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lch03016
]
Lcho_0584
Enzymes [BR:
lch01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
Lcho_0584
Transfer RNA biogenesis [BR:
lch03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
Lcho_0584
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TRAM_2
B12-binding
Fer4_12
Motif
Other DBs
NCBI-ProteinID:
ACB32859
UniProt:
B1XYX5
LinkDB
All DBs
Position
complement(632534..633943)
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AA seq
469 aa
AA seq
DB search
MHTPTLTSTPTTATSVVDDTAPAASGKKVYIRTFGCQMNEYDSDKMSDVMAAAEGYTPTD
DPEQADLILFNTCSVREKAQEKVFSDLGRVKHLKARGVLIGVGGCVASQEGAAIIERAPY
VDVVFGPQTLHRLPQMLAQRARQGRPQVDISFPEIEKFDHLPPAKVDGAAAFVSIMEGCS
KYCSYCVVPYTRGEEFSRPFDEVLTEVAGLADQGVKEVTLLGQNVNAYRGRMGDTSDIAD
FATLLEYVHEIPGIERIRYTTSHPNEFTPALIEAYARLPKLVNHLHLPVQHGSDRILSGM
KRGYTVLEYKSTIRKLRAIRPDISLSTDFIVGFPGETDDDHARTMKLIDDIGFDASFSFI
FSPRPGTPAAALHDDTSYEVKLARLQQLQATIEDNVRRISERRVGTVQRVLVEGPSRRDP
NELMGRTECNRIVNFDGGPNAARLVGRMIDIRITLAYPHSLRGEPVLRD
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgcacacccccaccctcacttccaccccgactaccgccacgtccgtggtcgacgacacg
gcgcccgccgcatccggcaagaaggtctacatccgcaccttcggctgccagatgaacgaa
tacgactcggacaagatgtccgacgtcatggccgccgccgagggctacacgcccaccgac
gacccggagcaggccgacctgatcctgttcaacacctgctcggtgcgcgagaaggcgcag
gaaaaggtcttcagcgacctcggccgcgtcaagcacctcaaggcccgcggcgtgctgatc
ggcgtgggcggctgcgtggccagccaggaaggcgcggcgatcatcgagcgcgcaccgtat
gtcgacgtggtgttcggcccgcagacgctgcatcgcctgccgcagatgctggcgcagcgc
gcccgtcaaggccgtccacaggtcgacatcagcttccccgagatcgagaagttcgaccac
ctgccacccgccaaggtcgacggtgcggcggcgttcgtgtcgatcatggaaggctgcagc
aagtactgctcgtactgcgtcgtgccctacacgcgcggcgaggagttcagccggccgttc
gacgaggtgctgaccgaggtcgccggactggccgaccagggcgtcaaggaagtgacgctg
ctgggccagaacgtcaacgcctaccgcggccggatgggcgacacgtcggacatcgccgac
ttcgccacgctgctcgaatacgtgcacgagatccccggcatcgagcgcatccgctacacc
accagccatccgaacgagttcacgccggcgctgatcgaggcctacgcccgcctgcccaag
ctggtcaatcacctgcacctgccggtgcagcacggctcggatcgcatcctgtcgggcatg
aaacgcggctacacggtgctcgaatacaagagcacgatccgcaagctgcgcgcgatccgc
cccgacatcagcctgtcgaccgacttcatcgtcggtttccccggcgagaccgacgacgac
catgcccgcaccatgaagctgatcgacgacatcggtttcgacgcgtcgttcagcttcatc
ttcagcccgcgccccggcacgccggccgccgcgctgcacgacgacacgtcgtacgaggtc
aagctcgcgcgcctgcagcagttgcaggcgacgatcgaggacaacgtgcgccgcatcagc
gagcgccgcgtcggcacggtgcagcgcgtcctggtcgaaggcccgagccggcgcgatccg
aacgagctgatgggccgcaccgagtgcaaccgcatcgtcaacttcgacggcggcccgaac
gcggcgcggctggtcggtcggatgatcgacatccgcatcacgctggcctatccgcactcg
ctgcgtggcgagccggttctgcgcgactga
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