Leptothrix cholodnii: Lcho_0747
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Entry
Lcho_0747 CDS
T00681
Name
(GenBank) outer membrane adhesin like proteiin
Organism
lch
Leptothrix cholodnii
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LapA
Calx-beta
VWA_2
HemolysinCabind
DUF1194
Lyase_8_C
Cadherin_4
Motif
Other DBs
NCBI-ProteinID:
ACB33020
UniProt:
B1Y0N9
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All DBs
Position
complement(796284..801080)
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AA seq
1598 aa
AA seq
DB search
MSDAPAVQQTVTPPPSPDHQLAGARLQAAYAPARLPAGTVSNVWGAAVRRNADGELHALQ
PGDIVRSGDVILTTQDGIVEITVGRQLSVRLPPPDETPPPTATPASDADNSAELVFDAPG
AGLAGGSDSGGLQAAERVERIVEVVTPQQYLYDLAMAHGDAGPFATTAPAAQAPAADPDP
TAADTSTAQPHIGGTGEAAATRVRISGPGSVIEGQVSSDYTVTLSQPAQADTTVTLAYAG
SATSGADFQPVLVVTIPAGASSASFQLPVMADAAVEGSETITVSLASVSGGTGPITIDGT
ANAVTTQIVDGTVAPAPEPSPAPAPAPEPPAEPAPAPTPAPAPVPTPAPAPAPAPAPAPA
PVPAPAPEPPAEPAPAPAPAPIPTAPEPAPAPSPAPEPPPSPAPAEAAILSISGPGSVVE
GELASGYTVTLDTPAATDMTVWLAFSGSATGGVDYAHQFVSVTIQAGARAATFDLSTIDD
AYAEGTETLVVSIAGSNGGGFANVAISSSAGSVTTMLMDDVVPSGPPGPGPGTAPGPEDT
ATLSISGPGTVIEGHVTADYTVTLDKAAATDMTVRLSYAGTATDGADYVGAVVEITIKAG
STSATVALSALNDHAVEGTESVIVSIAGTSGGGFENVVIASGAGSVGTQIIDGALPVIGG
QLSAQVSEEGLAGGQADDVGAHPGDDSTDARSFSGQLSFSDADSAQLSVTLSAPPDALSS
GGQAIVWTGDGSTTLVGHVGTADGAEALRVSIDAGGAYEVTLSRPLDHGAAGEDRLSLGV
GVHLSDGVHGRDATIELQIDDDAPLARNDSVSATAARTNLLISLDVSGSMDTADGVAGAT
RLASAIEAIGQLLDRHEAMGDVAVRLVTFSSTAQAIGEVWTDVATARQLLASLQADGGTH
YDSALAAAQSAFLSAGRLAGAQNVSYFLSDGEPNRGHGIDSAEQRQWESFVTSQAIDSRA
IGLGDSTTQASMDGIAYDGSSGHDTDALRVSDFNQLDAVLSTPVQAPVSGQLIAGGGADG
ARIASITIDGVTYTYHPGPPGSVGVQAGTGTNAGSHDAQTGVLSVALAHGGSLAVQLDSG
AYTFSPGAEAGRTDVRFTLIDGDGDTADGTLGLDVVRPPDQAAVIGGVDHGDVTEAGSLT
ASNGCDRDHDSSRSSASSTHGQLSVHDGDGPAQARFQPVGSGASTLGLGQYGIDASGRWT
YTLDNGHPKVDALAPGQTLTDRFVVHSADGTAQTVTITIHGSNDAPTVRASGGGGLLGLI
DANVLDILDFGRQQAFGAHDVDGDLKQVELHYDSGLLGKLTSLVTTTHHFAYDVRLAAEL
GLQVLENTTPAQTGGLLGTLGGLLCSNESTLTITAADGGTLSNPLINEFLASVHLENSGG
LLGDAVNAKLLSATTLTATDSAGATAQANVGSLLTVDVLAAEAQTTVTTDSTSGGHALDG
STGSDRLYGLDGDDTLAGGAGADLLRGGSGDDVLAGGLGADVLRWHLADAGSAASPARDR
IADFDVGTPANGGDLLDLRDLLLGEQHFGNDVGNLADFLDFKLDSSGQSTLLEVRSQGAT
GPVDQVIEFTGVDLIGAAGGDQQQVIQHLLQSGKLITD
NT seq
4797 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacgctcctgctgtccagcaaacagtcacccctccccccagccccgaccaccag
ctggccggcgcccgattgcaggccgcctacgccccggcacgcctgcccgcgggcacggtg
tccaacgtctggggcgcggccgtgcgccgcaacgccgacggcgagctgcacgccctgcag
cccggcgacatcgtgcgcagcggcgacgtcatcctgacgacgcaggacggcatcgtcgaa
atcaccgtcggccgccagctctcggtgcgactgccaccgcccgacgagacaccgcccccc
accgccacgcccgcctcggacgcggacaacagcgccgaactggtgttcgacgcgcccggc
gccggcctcgcgggcggcagcgacagcggcggcctgcaggcggcagagcgggtcgagcgc
atcgtcgaggtggtcacgccgcagcagtacctctacgacctggcgatggcgcacggcgat
gccggcccgttcgcgacgaccgccccggcggcccaggcgccggcagccgatcccgacccg
accgcggccgacacgtcgaccgcccagccccacatcggcggcaccggcgaggcggcagca
acccgggtccgtatcagcggcccgggctcggtgatcgaaggccaggtctcatccgactac
accgtcacgctgagccagccggcgcaggccgacaccaccgtcacgctcgcctacgccggc
agcgccaccagcggcgccgacttccagcccgtgctcgtcgtcacgatccccgccggcgcc
agcagcgcgagcttccagctgccggtgatggctgacgcggccgtcgaaggcagcgaaacc
atcaccgtcagcctcgcctccgtcagcggcggcaccggcccgatcaccatcgacggcacc
gccaacgccgtcaccacgcagatcgtcgacggcaccgtggctccggcacctgaacccagc
ccggcaccagctccagctccagagcctcccgcagagcccgctcctgcgcccaccccggcc
cccgcgccagtgcccactccagctccagcgccagcaccggctccagcgccagcaccggct
ccagtgccggcacccgctccagagcctcccgcagagcccgctccagctccagctccagct
cccatcccaacggcgccagaaccggcacctgcgccgtccccggcgcccgagccgccgcct
tcgcccgctccggcggaagcggcgatcctgtcgatttccgggccgggctcggtggtcgag
ggcgagctggcgtcgggctacacggtgacgctcgacacgccggcggccaccgacatgacg
gtctggctggcgttttccgggtcggcgaccggtggcgtcgactacgcgcaccagttcgtt
tcggtcaccatccaggcgggagctcgtgcggcgacgttcgatctgagcacgatcgacgac
gcctacgcggaaggcacggaaaccctcgtcgtgtcgatcgccggctcgaacggcggcggc
ttcgcgaacgtggcgatctcgtcgagcgcgggctcggtgacgacgatgctgatggacgac
gtcgtgccgtccggcccgccaggtccgggcccaggcaccgcgccgggcccggaggacacc
gcgacgctgtcgatctcggggccgggcacggtgatcgagggtcatgtgacggcggactac
acggtcacgctcgacaaggccgccgccaccgacatgaccgtgcggctgagctacgccggc
acggccaccgacggcgccgactacgtgggcgcggtcgtggagatcacgatcaaggccggc
tcgacctcggccaccgtggcgctgtcggcactgaacgaccacgcggtcgagggcaccgag
tcggtgatcgtctcgatcgccggcacctcgggcggcggcttcgagaacgtggtgatcgcg
tcgggcgcaggctcggtcggcacgcagatcatcgacggcgccttgcccgtgatcggcggc
cagctgagcgcgcaggtgtccgaagaaggcctggccggcggccaggccgatgacgtcggc
gcacaccccggtgacgacagcaccgacgcgcgcagcttcagcggccagctgagcttcagc
gacgccgacagcgcacagctgagcgtgacgctgagtgccccgccggacgcgctgagttcg
ggcgggcaggcgatcgtctggaccggcgacggcagcaccacgctggtcggccacgtcggc
acggccgacggcgccgaggcgctgcgcgtcagcatcgacgccggcggcgcctacgaggtg
acgctgtcgcgcccgctcgaccacggcgcggccggcgaagatcgactctcgctcggcgtg
ggcgtgcacctgagcgacggcgtgcacggccgcgacgcgacgatcgaactgcagatcgac
gacgacgcgccgctggcccgcaacgacagcgtcagtgccacggcggcgcgcaccaacctg
ctgatcagcctcgacgtgtcgggcagcatggacaccgccgacggcgtggccggcgcgacc
cggctggccagcgcgatcgaggcgatcggccagctgctcgaccgccacgaggcgatgggc
gatgtggccgtgcggctggtgacgttctcgtcgaccgcgcaggccatcggcgaggtctgg
accgacgtggccacggcccggcagctgctcgccagtctgcaggccgacggcggcacgcac
tacgactcggcgctggcggcagcgcagagcgccttcctgagcgccggcagactggcgggc
gcgcagaacgtcagctacttcctgtcggacggcgagcccaaccgcggccacgggatcgac
agcgccgagcagcggcagtgggagtccttcgtcaccagccaggcgatcgacagccgcgcg
atcggcctgggtgacagcacgacgcaggccagcatggacggcatcgcctacgacggcagc
agcgggcacgacaccgacgcgctgcgggtgagcgacttcaaccagctcgacgcagtgctg
agcaccccggtgcaggcgccggtcagcggccagctgatcgccggcggcggcgccgacggg
gcgcgcatcgcgtcgatcacgatcgacggcgtgacctacacctaccaccccgggccaccg
ggcagcgtcggcgtgcaggcgggcaccggaacgaacgccggcagccatgacgcgcagacc
ggcgtgctgagcgtggcgctggcgcacggcggcagcctggcggtgcagctcgacagcggc
gcctacaccttcagcccgggcgccgaggcgggtcgcaccgacgtgcggttcacgctgatc
gacggcgatggcgacaccgccgacggcacgctcgggctcgacgtggtgcggccgccggac
caggcggccgtgatcggcggcgtcgaccacggcgacgtgaccgaagcgggcagcctcacc
gccagcaacggttgcgaccgcgaccatgacagcagccgttcgtcagccagcagcacgcac
ggccagctcagcgtgcacgacggcgacgggcccgcgcaggcccggttccagccggtcggc
agcggcgccagcaccctcggcctgggccagtacggcatcgacgccagcggccgctggacg
tacacgctcgacaacggccacccgaaggtcgacgcgctcgccccgggccagacgctgacc
gaccgcttcgtcgtgcacagcgccgacggcaccgcgcagaccgtgacgatcacgatccac
ggcagcaacgacgcaccgaccgtgcgcgccagcggcgggggcggcctgctgggcctgatc
gatgccaacgtgctcgacatcctcgacttcggccgccagcaggccttcggcgcccacgat
gtcgacggcgacctgaagcaggtcgagctgcattacgacagcggcctgctcggcaagctg
acgagcctcgtcaccaccacccaccacttcgcctatgacgtgcggctggccgccgaactg
ggcctgcaggtgctcgagaacaccacgccagcgcaaaccggcggcttgctcggcacgctc
ggcggcctgctgtgcagcaacgagtcgacgctgaccatcaccgcagccgacggcggcacg
ctgagcaacccgctgatcaacgagttcctggccagcgtgcacctcgagaacagcggcggc
ctgctcggcgatgcggtcaacgccaagctgctgtcggccaccacgctgacggccaccgac
agcgccggcgccaccgcgcaggcgaatgtcggcagcctgctgacggtcgacgtgctggcc
gccgaggcgcagaccacggtcacgaccgacagcacgagcggcggccatgccctggacggc
agcacgggcagcgaccggctctacggcctcgatggcgacgacaccctcgccggcggcgcc
ggcgccgacctgctgcgcggcggcagcggcgacgacgtgctggccggcggcctgggcgcc
gatgtgctccggtggcacctggcggacgccggcagcgccgccagcccggcacgggaccgc
atcgcggacttcgacgtcggcacacccgccaacggcggcgacctgctcgacctgcgcgac
ctgctgctcggcgagcagcacttcggcaacgacgtcggcaacctggcggacttcctcgac
ttcaagctcgacagcagcggccagtcgaccctcctcgaggtgcgatcgcagggcgcgacc
gggccggtcgatcaggtgatcgagttcaccggcgtcgacctgattggcgctgccggcggc
gatcagcagcaggtgatccagcacctgctacaaagcggcaagctgatcaccgactga
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