Leptothrix cholodnii: Lcho_0822
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Entry
Lcho_0822 CDS
T00681
Name
(GenBank) TRAP C4-dicarboxylate transport system permease DctM subunit
KO
K21393
TRAP-type transport system permease protein
Organism
lch
Leptothrix cholodnii
Pathway
lch02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
lch00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Lcho_0822
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lch02000
]
Lcho_0822
Transporters [BR:
lch02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
Lcho_0822
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctM
DctQ
CitMHS
Motif
Other DBs
NCBI-ProteinID:
ACB33094
UniProt:
B1Y1B7
LinkDB
All DBs
Position
885208..887094
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AA seq
628 aa
AA seq
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MSHALSSTPVDPDETAAPPPGVAAFNRALARWIAPIELVTALLMAAIVAMLFGGVVARYA
FGRPITWIDEIVSFAFIWVAMLGAVLAMHRNEHLRLSMFVDRMSPRLREYVHAFALVAMA
TFLMGLIGPAIEHVEVEWIVETPALGIPGGLRVAAIAVGLVLMLAVVAIYSVRTVPKAAL
ATAILGVGAFVGLCLWLSPQFMQLGLFNIVIFLTGVVALCLFAGVPIAFCFGCGVMSFLA
FSSNVPLIVIVGRIDEGMANMVLVSVPIFVLLGCVLDATGMGKAIVDLLASLIGHVKAGM
SYVLLGSLFIVSGISGSKVSDMATVAPALFPEMRRRGNKQPEMVALLATGAAMADTVPPS
IVLIVLGSVAGVSIAGLFESGFVVAMVLLLSLLLLARWKARHEDTSSVRRPPLKAIGKLA
LVAAPALVLPFLIRSAVGGGIATATEVSTIAVLYAMLIGQVLYGGLGWKRVYSMLVETAA
LSGAILLILGTASAMAWAITQSGLVQQMSQVLTTLPGGWIAFMGVTVLVFLVLGCLLEGL
PAVLLLAPIMFPIAKKLGIHEIHYSMVIVCAMNVGLMMPPIGVGFYVACRIGDAKPDDAM
VAIWPYIAALLGGVIVIAMFPWFSTFML
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcacgccctctccagtaccccggtcgatcccgacgagaccgcggccccgccgcct
ggcgtggcggcgttcaaccgtgcgcttgcccgctggatcgcgccgatcgaacttgtcact
gcgctgctgatggcggccatcgtcgcgatgctgtttggcggcgtggtggcccgctacgca
ttcgggcgaccgatcacctggatcgacgagatcgtctcgttcgcgttcatctgggtggcg
atgctgggcgccgtgctggccatgcatcgcaacgagcaccttcgcctgtcgatgttcgtg
gaccggatgtcacctcggctgagggagtatgtacacgccttcgccctggtcgcgatggcc
acgttcctgatgggactgatcggaccggccatcgagcatgtggaggtcgagtggatcgtg
gaaacgccggcactcggcattccgggtggcttgcgtgtggcggcgattgccgtcggactc
gtgctgatgctggccgtcgtcgccatctactcggtccgcacggtccccaaggcagcgctc
gcgacggccatcctgggggtcggtgccttcgtcggcctgtgcctttggttgtcgccgcag
ttcatgcaactgggcctgttcaacatcgtcattttcctgaccggcgtggtcgcgctgtgc
ctgttcgccggggtacccatcgccttctgcttcggctgcggcgtgatgagcttcctcgct
ttctccagcaacgtgccgctgatcgtcatcgtcgggcgcatcgacgagggcatggccaac
atggtgctcgtctcggtgccgatcttcgtgctgctgggctgcgtgctcgatgccaccggc
atgggcaaggcaatcgtcgatctgctggcgtcgctgatcggacacgtcaaggccggcatg
tcctacgtgctgctgggttcgctgttcatcgtctcgggcatctcgggttccaaggtctcc
gacatggcgaccgtcgctccggcgctgttcccggagatgcgccggcgcggcaacaagcaa
cccgagatggtggcgctgctcgccacaggtgcggcgatggccgacaccgtgccgccgagc
atcgtgctgatcgtgctcggctcggtcgctggcgtgtcgatcgccggcctgttcgagagc
ggcttcgtcgtcgcgatggtgctgctgctgtcgctgctcctgctggcgcgctggaaggcc
cgtcacgaagacaccagcagcgtgcgccgcccgccgctgaaggcgatcggcaaactggcg
ctggtggccgctcccgcgctggtcttgcccttcctgatccgcagtgcagtgggcgggggc
atcgcgaccgctaccgaggtgtcgacgatcgcggtcctctacgcgatgctgatcggccag
gtgctctacggcgggctgggctggaagcgcgtctattcgatgctggtcgagacggccgcg
ctcagtggcgcgattctcctgatcctcggcacggcgtccgccatggcctgggccatcacc
cagagcggcttggtccagcagatgtcgcaggtgctcaccaccttgcccggcggctggatc
gccttcatgggcgtcacggtcctggtcttcctggtgctcggttgcctgctcgaaggcctg
cccgccgtgctgctgctcgcgccgatcatgttcccgatcgccaagaagctcggcatccac
gagatccactactccatggtgatcgtctgcgccatgaacgtgggtttgatgatgccgccg
atcggcgtcggcttctatgtcgcctgccgcatcggcgacgccaagcccgacgacgccatg
gtcgcgatctggccctacatcgcagcgctgctgggtggtgtgatcgtgatcgcgatgttc
ccctggttctccaccttcatgctctga
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