KEGG   Leptothrix cholodnii: Lcho_0870
Entry
Lcho_0870         CDS       T00681                                 
Name
(GenBank) type IV secretion/conjugal transfer ATPase, VirB4 family
  KO
K03199  type IV secretion system protein VirB4 [EC:7.4.2.8]
Organism
lch  Leptothrix cholodnii
Pathway
lch03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:lch00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Lcho_0870
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:lch02044]
    Lcho_0870
Enzymes [BR:lch01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     Lcho_0870
Secretion system [BR:lch02044]
 Type IV secretion system
  Conjugal DNA-protein transfer (VirB/D) protein
   Lcho_0870
SSDB
Motif
Pfam: CagE_TrbE_VirB P-loop_TraG FtsK_SpoIIIE AAA_29 nSTAND3
Other DBs
NCBI-ProteinID: ACB33142
UniProt: B1Y1W2
LinkDB
Position
complement(934655..937147)
AA seq 830 aa
MLGMSRKVGKVGTADLSGQMALQPHYWAQAHRENPLARFVPFSSLVSPHDVISRGGDYLR
VWRLDGVPFECADEHLIAERHEALCSLLRSLAGGQWAVWTHRLHRRTHDALTDPREPGFA
RELSQAYQRRLASQPMMSNELYLTLVYRPNVSRISRALQSKHRSRQAIAEAQAEALRVME
ERSALVDRVLRGFGPQLLGVREDRDQRWSEVAEFLSYLVNGRSRPIPARTGPLYRVLPTT
RLSFGGDKLELRHGDQRRYAALVDIKEYADAVEPGILDTLLYEASEFIETQSFSILPRRD
AMRALELQRDQLIASDDVVSSQVAEMDVALNELGDGQFCMGEYHYSLVVFGDDVADAGRR
ASQAIGAVGEASSLQMAPVDLVADAAWFAQMPGNWSWRPRDAKLSSRAFAALACGHNFPR
GKRDGNPWGEALALLRTPSGQPFYLNLHSSPEGEDSADKKLPGNTLIIGSTGVGKTTLEM
FLLVLTRKWQPAPRLVLFDLDRGCEIAVRALGGEYLAFEAGRPTGCNPLQREPTPERLQF
WEQLIRTCVATTALPLLPSDERAIADAVRAVAMMPAHLRRFSTVRQNLPKTGENSLYERL
GRWCDGGALGWVFDQAPDQLGLLSATRVVGFDTTEFLDLPEVRTPVMMVLLQMMDEWVNG
ERLIYVISEFWKALDHAVFSDFAKQKQKTIRKQNGLGIFDTQSPSDVLRHPIGRTMIEQS
VTKIFLANPEAVHDEYVDGFGLSEAEYETVRSLSAQGGRRFLVKQGATSAICELDLSGLE
DFITVLSATTDNVALLDELRSQVSHDPKAWIPLLQRAVRARKARAAGSQS
NT seq 2493 nt   +upstreamnt  +downstreamnt
atgcttggcatgtctaggaaggtcgggaaggtcggcacagccgacctgtcaggccagatg
gcgctgcagccccactactgggcccaggctcatcgcgagaacccgctcgcgcgcttcgtg
cccttctcttcgctggtcagcccgcacgacgtcatctcgcgcggcggcgattacctgcgg
gtctggcgcctggacggcgtgcccttcgagtgcgccgacgagcacctgatcgccgaacgc
catgaggccctgtgcagcctgctgcgcagcctggccggcggccagtgggcggtctggacg
caccggctgcatcggcgcacccacgatgcgctcacagatccgcgcgagccgggttttgcg
cgcgagctgtcgcaggcttaccaacgccggctggccagccagccgatgatgagcaacgag
ctctacctgacgctggtctatcggccgaacgtgtcgcgcatcagccgggcgctgcagtcg
aagcaccgttcccgccaggcgattgccgaggctcaggccgaggccctgcgggtgatggaa
gaacgcagcgcgctggtcgaccgcgtgctgcgcggcttcggaccgcagctgctgggtgtg
cgcgaagaccgcgaccagcgctggtccgaggtggccgagttcctgtcctacctggtcaac
ggccgctcgcgcccgatcccggccaggacagggccgctgtaccgcgtgctgcccaccacc
cgcctgagcttcggtggcgacaagctggagctgcgccacggcgatcagcgtcggtatgcc
gcgctggtcgacatcaaggaatacgccgacgcggtcgagcccggcatcctcgacaccctg
ctctacgaggccagcgagttcatcgagacgcagagcttctcgatcctgccgcgcagggac
gcgatgcgggccttggagctgcagcgcgaccagctgatcgccagcgacgacgtggtcagc
agccaggtcgccgagatggacgtggcgctcaacgaactcggcgacggccagttctgcatg
ggtgagtaccactacagcctggtggtgttcggcgacgacgtggccgacgccggccggcgc
gcgtcacaggccatcggcgcggtcggcgaggcgtcgagcctgcagatggccccggtcgac
ctggtcgccgacgcggcctggttcgcgcagatgccgggcaactggtcgtggcgtccacgc
gatgccaagctgtcctcgcgcgccttcgcggcgctggcctgtggccacaacttcccgcgt
ggcaagcgcgacggcaacccctggggcgaggccctggccctgctgcgaacgccgtctggc
cagcccttctacctgaacctgcacagcagcccggagggcgaggattcggccgacaagaag
ctgccgggcaacaccctcatcatcggctcgaccggcgtcggcaagaccacgctggagatg
ttcctgctggtgctgacgcgcaagtggcagcccgcgccccggctggtgctgttcgacctg
gaccgtggctgcgagatcgcggtgcgcgcgctcggcggcgagtacctggccttcgaggcc
ggccggcccaccggctgcaacccgctgcagcgcgagccgacgcccgagcggctgcagttc
tgggagcagctgatccgcacctgcgtggccaccacggccctgccgctgctgccgtccgac
gagcgtgccatcgccgatgcggtgcgggcggtggcgatgatgccggcccacctgcggcgc
ttctcgaccgtgcgccagaacctgcccaagaccggcgagaacagcttgtacgagcgcctg
gggcgctggtgcgatggcggcgcgctgggctgggtgttcgatcaggcgccggatcagctc
ggactgctgtcggccacccgcgtggtgggcttcgacaccaccgagttcctggacctgccc
gaggtgcgcacgccggtgatgatggtgctgctgcagatgatggacgagtgggtgaacggc
gagcgcctgatctacgtgatctcggagttctggaaggcgctggaccacgcggtcttcagc
gacttcgccaagcagaagcagaagaccatccgcaagcagaacgggctgggcatcttcgac
acccagagcccgtcggacgtgctgcgccacccgatcggtcggaccatgatcgagcagagc
gtcaccaagatcttcctggccaacccggaggcggtgcacgacgagtacgtcgacggcttc
gggctcagcgaggcagagtacgagacggtgcgcagcctgagtgcccagggtggccggcgc
ttcctggtcaagcagggagccaccagcgcgatctgcgagctggacctgtcggggctggaa
gacttcatcaccgtgctgtcggccaccaccgacaacgtcgcgctgctcgacgagctgcgc
agccaggtcagccacgatccgaaggcctggattccgctgctgcagcgcgccgtgcgggcg
cgcaaggcgcgtgcggccgggagtcagtcatga

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