Leptothrix cholodnii: Lcho_0887
Help
Entry
Lcho_0887 CDS
T00681
Name
(GenBank) transcriptional regulator, GntR family
KO
K03710
GntR family transcriptional regulator
Organism
lch
Leptothrix cholodnii
Brite
KEGG Orthology (KO) [BR:
lch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lch03000
]
Lcho_0887
Transcription factors [BR:
lch03000
]
Prokaryotic type
Helix-turn-helix
GntR family
Lcho_0887
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTRA
GntR
HTH_41
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
ACB33159
UniProt:
B1Y1X9
LinkDB
All DBs
Position
950483..951244
Genome browser
AA seq
253 aa
AA seq
DB search
MNETTQGLGSIDRTSEVPYYLQLARLLEQSIDAGSYGPGDRLPGETELCTDYGLARSTVR
ETLRHLLDQGRIKLVPRRGAFVAERIDPGWRLQGTQGFFEVEVDQHHSVETRVLEATRCV
LPDAAAAALELPPASAGFKLARVRSLDGKLALYSINYLLPEVEAVLRASEVITGVGSLNR
TLQSAGYATVRARRTVEAVAADEVLATLLGVQTGHPLLLVTSVSWDRDNKPLDFYTSWLR
NDIVKVTVEAQAA
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaaacgacgcagggtctgggatccatcgaccgcacgtccgaggtgccttactac
cttcaactcgcgcgcttgctggaacagtcgatcgacgccggcagctacgggccgggcgat
cgcctgcccggcgagaccgagctctgtaccgactacgggctggcgcgctcgaccgtgcgc
gagacgttgcgccatctgctggaccaagggcgcattaagctggtgccacgtcggggtgcg
ttcgtggccgagcgtatcgatccgggatggcggctgcaggggacacaaggattcttcgag
gtggaggtcgaccagcaccacagtgtcgagacgcgggtgctggaggcgacacgctgcgtt
ctgcccgacgcggccgccgccgcgctggaactgccaccggcctcggcgggcttcaagctc
gctcgcgtgcgcagcctggacggcaagctggcgctctattcgatcaactacctgcttccc
gaggtcgaggccgtcctgcgtgccagcgaggtgatcacgggtgtcggctcgctgaaccgg
acgctgcagtcggcgggatatgcgaccgtccgcgcacgccggacggtggaggccgtggcg
gcggacgaggtcctcgcaacgctcctcggtgtccagaccggtcaccccctgctgctggtg
acgtctgtttcctgggaccgcgacaacaagccactcgacttctacacgtcgtggttgcgc
aacgacatcgtcaaggtgacggtcgaggctcaggcagcctga
DBGET
integrated database retrieval system
