Leptothrix cholodnii: Lcho_0917
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Entry
Lcho_0917 CDS
T00681
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
lch
Leptothrix cholodnii
Brite
KEGG Orthology (KO) [BR:
lch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lch03400
]
Lcho_0917
DNA repair and recombination proteins [BR:
lch03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Lcho_0917
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
DnaB_C
AAA_16
AAA_22
ChlI
AAA_30
Lon_C
AAA_24
DUF7125
AAA_5
nSTAND3
RecA
AAA_14
GvpD_P-loop
NTPase_1
SLFN-g3_helicase
Zn_Ribbon_YjdM
DUF7129
Rad51
MCM
ATPase_2
Zn_ribbon_tTFIIB
AAA
PAXNEB
CobU
AAA_19
AAA_29
DAP3
ABC_tran
NACHT
zf-RING_10
zinc_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
ACB33189
UniProt:
B1Y2H3
LinkDB
All DBs
Position
complement(981754..983124)
Genome browser
AA seq
456 aa
AA seq
DB search
MARDNKTIYTCRECGGTSAKWLGKCPHCNAWNTLEEGVAEPAAGTAKNRFQGLTRSQPVA
TLGDIQAAEVSRTPTGLEELDRVLGGGIVEGGVVLIGGDPGIGKSTLLLQAAEALSAQMK
VLYVTGEESAAQLALRAHRLGLSGKNLRVLAEIGLEKILATLEAEQPAFCVIDSIQTLYS
DQLSAAPGSVSQVRECASHLTRSAKASGCTVVLVGHVTKEGAIAGPRVLEHIVDTVLYFE
GDTHSSFRLVRAIKNRFGAVNEIGVFAMTERGLKGVANPSAIFLSTHGEPVPGACVLVTL
EGTRPMLVEIQALVDNGGPSPRRLSVGLDRDRLAMLLAVLHRHAGVACADQDVFVNAVGG
VRISEPAADLAVLLAIQSSLRGRALPRGFIAFGEVGLAGEVRPAPRGQERLKEAAKLGFS
VAVVPKANAPKKPIEGLTVHAVERIEEAISLTRSLT
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggcacgcgacaacaagacgatctacacctgccgcgaatgcggcggcaccagcgccaag
tggctgggcaaatgcccgcactgcaacgcctggaacacgctcgaagaaggtgtcgccgag
ccggccgccggcaccgccaagaaccgcttccagggcctgacgcgcagccagcccgtcgcc
acgctgggcgacatccaggcggccgaggtctcgcgcacgcccaccgggctggaagaactc
gaccgcgtgctcggcggtggcatcgtcgaaggtggcgtggtgctgatcggcggcgacccc
ggcatcggcaagagcacgctgctgctgcaggcggccgaggcgctgtcggcgcagatgaag
gtgctgtacgtgaccggcgaggagtccgccgcccagctcgcgctgcgcgcccaccggctc
ggcctgagcgggaaaaacctgcgcgtgctggccgagatcgggctcgagaagatcctcgcc
acgctcgaggccgagcagccggccttctgcgtcatcgactcgatccagacgctctactcc
gaccagctcagcgccgcgcccggctcggtgtcgcaggtgcgcgagtgcgcctcgcacctc
acgcgcagcgccaaggcgagcggctgcaccgtcgtgctggtcggccacgtgaccaaggaa
ggcgccatcgccggcccgcgcgtgctcgaacacatcgtcgacacggtgctgtatttcgag
ggcgacacgcacagcagcttccgcctggtgcgcgcgatcaagaaccgcttcggcgcggtc
aacgagatcggcgtgttcgcgatgaccgaacgtggcctcaagggcgtggccaacccgagc
gcgatcttcctgtcgacccacggcgagccggtgccgggcgcctgcgtgctggtgacgctc
gaaggcacgcggccgatgctggtcgagatccaggcgctggtcgacaacggcggcccgagc
ccgcgccggctgagcgtcggcctggatcgcgaccggctggcgatgctgctggcggtgctg
caccgccatgccggcgtggcctgcgcggatcaggacgtgttcgtcaacgcggtcggcggc
gtgcgcatcagcgagccggcggccgacctggcggtgctgctggcgatccagagctcgctg
cgcgggcgggccctgccgcgcggattcatcgccttcggcgaggtcggtctggccggcgag
gtgcggcccgcgccgcgcggccaggagcggctgaaagaggcggccaagctcggcttttcg
gtcgcggtggtgcccaaggcgaacgcgccgaagaagccgatcgagggcctgacggtgcat
gcggtcgagcgcatcgaggaggcgatctcgctgacccgctcgctgacctga
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