Leptothrix cholodnii: Lcho_0958
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Entry
Lcho_0958 CDS
T00681
Name
(GenBank) OmpA/MotB domain protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
lch
Leptothrix cholodnii
Brite
KEGG Orthology (KO) [BR:
lch00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lch02000
]
Lcho_0958
Transporters [BR:
lch02000
]
Other transporters
Pores ion channels [TC:
1
]
Lcho_0958
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
DUF748
Motif
Other DBs
NCBI-ProteinID:
ACB33230
UniProt:
B1Y2L4
LinkDB
All DBs
Position
complement(1022010..1022741)
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AA seq
243 aa
AA seq
DB search
MNKLNKVALLFATAALAACGSMGTGKVDNGNTGSSVGAWKNGTSELCWRNGFFTPGSGVQ
GCDGVPPPPAPAPAPVAAAPAPAPAPAPAPAPAPAPAPAPAVVPVPVPAPAPVPAPAAPA
APVSEKVTFAADAFFDTGKFVLKPDAASKLDDLVSKVKDINLEVIIAVGHTDSDGSDAYN
QKLGVNRAEAVKKYLVSKGVEQNRVYTEGKGEKQPVADNGTKEGKAKNRRVEIEVVGTRT
IKK
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaactcaacaaggtcgcactgctgttcgcaacggcggcactcgcagcttgcggc
tctatgggcacgggcaaggtcgacaacggcaataccggcagcagcgtcggcgcctggaag
aatggcaccagcgaactgtgctggcgcaacggcttcttcacgcccggctccggcgtgcaa
ggttgcgacggcgtccccccgccgccggcacctgctccggctccggtggcggctgctccg
gcaccggcgcccgcacccgcaccggcccccgctcctgcgccggcacccgcgcccgcgccg
gctgtcgtcccggttcccgtgcctgctccggcacccgttccggcgcctgcagcacctgcc
gcgcccgtcagcgaaaaggtcaccttcgcagccgacgcattcttcgacaccggcaagttc
gtgctcaagcccgatgccgcatccaagctcgacgatctggtcagcaaggtcaaggacatc
aacctcgaagtcatcatcgccgtcggtcacaccgattccgacggctcggatgcctacaac
cagaagctgggcgtcaaccgcgccgaagccgtgaagaagtatctggtcagcaagggcgtc
gagcagaaccgcgtgtacaccgaaggcaagggcgagaagcagcctgtcgccgacaacggc
accaaggaaggcaaggccaagaaccgccgcgtcgaaatcgaagtggtcggcacgcgcacc
atcaagaagtga
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