Leptothrix cholodnii: Lcho_0964
Help
Entry
Lcho_0964 CDS
T00681
Name
(GenBank) ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
lch
Leptothrix cholodnii
Pathway
lch03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
lch00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
Lcho_0964
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
lch03011
]
Lcho_0964
Ribosome [BR:
lch03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
Lcho_0964
Bacteria
Lcho_0964
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
OB_RRP5_4th
Motif
Other DBs
NCBI-ProteinID:
ACB33236
UniProt:
B1Y2M0
LinkDB
All DBs
Position
1030689..1032377
Genome browser
AA seq
562 aa
AA seq
DB search
MESFAAMFEESLQRSDMRAGEVISAEVVRVEHSFVVVNAGLKSEAYVPLEEFKNDKGELE
VQVGDFVSVAIDAIENGYGDTILSRDKAKRLASWLSLENSLESGEFVTGTVSGKVKGGLT
VLVNGIRAFLPGSLLDTRPVKDMSPYEGKTMEFKVIKLDRKRNNVVLSRRAVVEASMGEE
RAKLLETLREGAFVNGVVKNITEYGAFVDLGGIDGLLHITDMAWRRVRHPSEVVTVGQEL
TAKVLKFDAEKNRVSLGLKQMGDDPWIGVSRRYPSGTRIFGKVTNIADYGAFVEIEPGIE
GLVHVSEMDWTNKNVAPSKIVALGDEVEVMVLEIDEDKRRISLGMKQCKQNPWDEFAQNF
KRGDRVKGPVKSITDFGVFVGLAAGIDGLVHLSDLSWNETGEAAVRNFKKGQDVEAIVLG
IDVERERISLGIKQLDTDPFTNYTTLNDRGATVTGKVKTVDARGAEIQLNEEVTGYLRAS
EIARERVEDARNVLKEGDEVTTMIINVDRKLRSIQLSIKAKDSVEQQEAMQRLSADNRET
VGNAGTTSLGALLKAKLDQGNN
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atggaatcctttgccgcgatgttcgaagagtcgctgcagcgctctgacatgcgcgccggc
gaggtcatctcggctgaagtcgtgcgcgtcgaacacagcttcgtcgtcgtcaacgccggc
ctgaagtccgaggcctatgtgcctctcgaagaattcaagaacgacaagggcgagctcgaa
gtccaggtcggcgatttcgtttccgtcgccatcgacgcgatcgaaaacgggtacggcgac
accatcctgtcgcgcgacaaggccaagcgcctggcttcgtggctgtcgctcgagaactcg
ctggaatcgggcgagttcgtcaccggcaccgtgtcgggcaaggtcaagggcggcctgacc
gtgctggtcaacggcatccgcgccttcctgccgggttcgctgctcgacacgcgtccggtc
aaggacatgagcccgtacgagggcaagaccatggagttcaaggtcatcaagctcgaccgc
aagcgcaacaacgtcgtgctgtcgcgccgtgccgtggttgaagcttcgatgggcgaagag
cgcgccaagctgctcgagacgctgcgcgaaggtgccttcgtcaacggcgtggtcaagaac
atcaccgaatacggtgcgttcgtggatctgggcggcatcgacggcctgctgcacatcacc
gacatggcatggcgccgcgtgcgtcacccgagcgaagtggtgacggtcggtcaggaactg
accgccaaggtcctgaagttcgacgccgagaagaaccgcgtctcgctgggcctcaagcag
atgggcgacgacccgtggatcggcgtctcgcgccgctacccgtcgggcacccgcatcttc
ggcaaggtcaccaacatcgccgactacggtgcattcgtcgagatcgaaccgggcatcgaa
ggcctggtgcacgtctccgaaatggactggaccaacaagaacgtggctccgtcgaagatc
gtcgccctgggtgacgaagtcgaagtcatggtgctcgagatcgacgaggacaagcgccgc
atctcgctgggcatgaagcagtgcaagcagaacccgtgggacgagttcgcgcagaacttc
aagcgcggcgaccgcgtcaagggccccgtcaagtcgatcaccgacttcggcgtgttcgtc
ggtctggctgccggcatcgacggcctggtgcacctgtccgacctgagctggaacgagacc
ggcgaagcggccgtgcgcaacttcaagaagggccaggacgtcgaggcgatcgtcctgggc
atcgacgtcgagcgcgagcgcatctcgctgggcatcaagcagctcgacaccgacccgttc
accaactacaccacgctcaacgaccgtggcgcgacggtgaccggcaaggtcaagacggtg
gacgcccgtggcgctgaaatccagctcaacgaagaagtcaccggctacctgcgcgcttcc
gaaatcgcccgcgagcgtgtcgaagacgcccgcaacgtgctcaaggaaggcgacgaagtc
acgaccatgatcatcaacgtcgaccgcaagctgcgttcgatccagttgtcgatcaaggcc
aaggacagcgtcgagcagcaggaagccatgcagcgcctgtcggccgacaaccgcgaaacg
gtcggcaatgccggtaccaccagcctgggcgccctgctcaaggccaagctggaccaaggc
aacaactga
DBGET
integrated database retrieval system
