Leptothrix cholodnii: Lcho_0967
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Entry
Lcho_0967 CDS
T00681
Name
(GenBank) conserved hypothetical protein
KO
K19804
lipopolysaccharide assembly protein B
Organism
lch
Leptothrix cholodnii
Brite
KEGG Orthology (KO) [BR:
lch00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99986 Glycan metabolism
Lcho_0967
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Zn_ribbon_LapB
TPR_2
TPR_7
TPR_16
TPR_14
TPR_1
TPR_11
TPR_19
TPR_17
TPR_12
TPR_CcmH_CycH
TPR_10
HrpA_pilin
TPR_Slam
Motif
Other DBs
NCBI-ProteinID:
ACB33239
UniProt:
B1Y2M3
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All DBs
Position
1033191..1034345
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AA seq
384 aa
AA seq
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MDFDLQWLLLGLPVAFALGWLGSRLDLRHLRRETESSPRAYFKGLNLLLNEQQDKAIDAF
IEAVQQDPGSTDLHFALGNLFRRRGEYERAVRVHQHLLARADLPTSERDRAQHALAQDYL
KAGLFDRAEAAYKALEGTAFATDARLALLTLHESARDWKSAIEVARGLEATAAGSFAQRI
AHYWCELCLEADAAGDGAAADAALTKAREVAPQSARPLILSGQRLARAGRHTEALGLWTA
LSTVHPEAFSVIAGDYAASAQVCQRADEALVRLKALHLAAPSADLLLAALSLESDAAARR
RMLVQHLKENQSLSAALKLLQDPAAAPDDDGGESLAMQQAVGKALRPLRRYHCAACGFEA
QNYFWQCPGCHGWDTYPPRRLEDM
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atggactttgacctgcaatggctgctgctgggcctgccggtggcgttcgcgctcggctgg
ctgggctcgcgcctcgacctgcgccacctcaggcgcgaaaccgaatcctcgccgcgggcc
tatttcaagggcctgaacctgctgctcaatgaacagcaggacaaggccatcgatgccttc
atcgaggcggtgcagcaagacccgggcagcaccgacctgcacttcgcgctcggcaacctg
ttccgtcgccgcggtgaatacgaacgcgccgtgcgggtccaccagcacctgctggcacgc
gccgatctgcccaccagcgagcgcgaccgcgcccagcatgccctcgcccaggattacctg
aaagccggcctgttcgaccgtgccgaggcggcctacaaggcgctcgaagggacggccttc
gccaccgatgcgcggctggcgttgctgaccttgcacgagtccgcgcgggactggaaatcg
gccatcgaagtggcccgcgggctcgaggccaccgctgccggcagctttgcccagcgcatc
gcccactactggtgcgagctgtgtctggaggccgatgcggcgggtgacggcgccgccgcc
gacgccgcgctgaccaaggcgcgcgaagtggccccgcagtcggcacggccgctgatcctg
tcgggccagcgcctggcgcgtgcgggccggcacaccgaggccctgggcctgtggaccgcg
ctgtcgaccgtgcacccggaagccttttcagtcatcgccggtgactatgccgccagcgcc
caggtctgccagcgtgccgacgaggcgctggtccggctcaaggccctgcatctggcggcg
ccctctgccgacctgctgctggctgcgctgagcctggagtccgacgccgcggcgcggcgc
cggatgctggtgcagcacctcaaggaaaatcagagcctgagcgccgcactcaagctgttg
caggacccggccgccgcgccggacgacgatggcggcgaaagcctggccatgcagcaggcc
gtcggcaaggccttgcgccccttgcgccgctaccactgcgcggcttgcggtttcgaggca
cagaactacttctggcaatgccccggctgccacggctgggacacctatccgccgcgtcga
ctcgaggacatgtag
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