KEGG   Leptothrix cholodnii: Lcho_1041
Entry
Lcho_1041         CDS       T00681                                 
Name
(GenBank) DNA polymerase III, epsilon subunit
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
lch  Leptothrix cholodnii
Pathway
lch03030  DNA replication
lch03430  Mismatch repair
lch03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:lch00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Lcho_1041
   03430 Mismatch repair
    Lcho_1041
   03440 Homologous recombination
    Lcho_1041
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lch03032]
    Lcho_1041
   03400 DNA repair and recombination proteins [BR:lch03400]
    Lcho_1041
Enzymes [BR:lch01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Lcho_1041
DNA replication proteins [BR:lch03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     Lcho_1041
DNA repair and recombination proteins [BR:lch03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     Lcho_1041
SSDB
Motif
Pfam: RNase_T RNase_H_2 Rv2179c-like ACP_PD HHH_6 DNA_pol_A_exo1
Other DBs
NCBI-ProteinID: ACB33310
UniProt: B1Y3A7
LinkDB
Position
complement(1111587..1112312)
AA seq 241 aa
MRQIFLDTETTGLSHESGDRVVELGCVEMVNRRLTGRNLHHYFNPQRANHEEAVRVHGLT
DAFLADKPLFSAVAQEFVDFVRDAEIIAHNANFDVGFLDAELKRIGHPPLKQLVDKVTDS
LVMAREQFPGKANSLDALCRRLEVDNTSRTVHGALLDAGLLAEVYIRMTRGQNSLVIDDS
PVQSEQQVEQPLIAVDLTAFVLPVLVAEDEEIAAHEAVLSGLDKSSGGKTLWRSIGASVQ
V
NT seq 726 nt   +upstreamnt  +downstreamnt
atgcgccagatctttctcgacaccgaaaccaccggcctgagccatgagagcggcgaccgt
gtcgtcgaactgggctgcgtggagatggtcaaccgccgcctgaccgggcgcaacctgcac
cactatttcaacccgcagcgtgccaaccacgaagaggccgtgcgtgtccacggcctgacg
gacgcgttcctggcggacaaaccgttgttcagcgccgtggcgcaggagttcgtcgacttc
gtgcgcgatgcggaaatcattgcccacaacgcgaacttcgacgtcggcttcctcgatgcc
gaactcaagcgcatcggccacccgccgctcaagcaactggtcgacaaggtcaccgactcg
ctggtgatggcgcgcgagcagtttcctggcaaggccaactcgctggacgccttgtgcagg
cgactcgaagtcgacaacaccagccgcacggtgcacggcgccttgctcgacgccggcctg
ctggccgaggtctacatccggatgacccgcgggcagaactcgctggtgatcgacgacagt
ccggtgcaatctgaacaacaagtcgaacaaccgctgatcgctgtcgatctgacggctttc
gtgctgcctgtgctggtcgctgaagacgaagagatcgccgctcacgaggcggtgttgtcc
gggctcgacaaatccagcggcggaaaaaccctttggcgctcgataggggctagcgttcaa
gtttga

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