Leptothrix cholodnii: Lcho_1062
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Entry
Lcho_1062 CDS
T00681
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
lch
Leptothrix cholodnii
Pathway
lch03030
DNA replication
lch03410
Base excision repair
lch03420
Nucleotide excision repair
lch03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lch00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Lcho_1062
03410 Base excision repair
Lcho_1062
03420 Nucleotide excision repair
Lcho_1062
03440 Homologous recombination
Lcho_1062
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lch03032
]
Lcho_1062
03400 DNA repair and recombination proteins [BR:
lch03400
]
Lcho_1062
Enzymes [BR:
lch01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Lcho_1062
DNA replication proteins [BR:
lch03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Lcho_1062
DNA repair and recombination proteins [BR:
lch03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Lcho_1062
NER (nucleotide excision repair)
GGR (global genome repair) factors
Lcho_1062
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
ACB33331
UniProt:
B1Y3T7
LinkDB
All DBs
Position
1130970..1133774
Genome browser
AA seq
934 aa
AA seq
DB search
MNPDRARPTLLLVDGSSYLYRAYHAMPDLRGPDGQPTGAIHGLVAMLKLLRSQIGAEHAA
CVFDAKGPTFRDDWYPLYKAQRPPMPDDLRLQIEPIHEVVRLLGWPVLEVPGIEADDVIG
TLAQLAEKSGHRVVISTGDKDLAQLVTEHVTLINTMSRESLDIEGVKAKFGVPPDRIVDY
LTLMGDTVDNVPGVEKVGPKTAAKWIAEHGSLDGVVAAAGSIKGVAGENLRRALDWLPTA
RKLVTVKTDCDLSGHVPAWPALEALALREVDPDGLRAFYMRNGFRTWTRELEAQAPSAPV
IASAAAPALDDMAQASGNGDAPAQAPAPAADGAAGRYETIFTTEQLDAWIARLQAAPLVA
IDTETDSLDPMRARIIGISFAVQPLEAAYVPVGHDYPGAPDQLPLDEVLARLRPWLEDAG
TRKVGQNIKYDSHVFANHGVTVRGYAHDTMLESYVLEAHKPHGLASLADRHLGRSGINYE
DLCGKGAGQIPFSHVAVDQASTYSGEDSEMTLQVHQTLWPQLEAEPRLRELYETIEMPSA
EVLVRIERNGVLIDAGVLARQSHQLAQRMHTLEQEAHAIAGQPFNMSSPKQIGEILFTKL
GLPVKKKTASGAPSTDEEVLQELAADYPLPARILEHRSLAKLKGTYTDKLPLMVNPSTGR
VHTNYAQAVAITGRLSSNDPNLQNIPIRTAEGRRVREAFVAAPGHKLVSADYSQIELRLM
AHISGDANLLKAFADGMDVHRATAAEVFNIAAADVTSEQRRYAKTINFGLIYGMGAFGLA
ASLGIEQKAARDYIERYFARYPDVKRYMDETKAGAAQLGHVETLFGRRIVLPEIKGGNGP
RKAAAERQAINAPMQGTAADLIKLAMIAVQKAIDDEGRASKMIMQVHDELVLEVPEAELG
WAREALPRLMAGVAQLKVPLVAEVGEGANWEEAH
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atgaatccagaccgcgcccgccccaccctcctgctggtcgacggctccagctacctctac
cgcgcctaccacgcgatgcccgacctgcgcggccccgacggccagcccaccggtgccatc
cacggcctggtggccatgctcaagctgctgcgcagccagatcggcgccgaacacgcggcc
tgcgtcttcgacgccaagggcccgaccttccgcgacgactggtacccgctctacaaggcc
cagcgcccgccgatgcccgacgacctgcggctgcagatcgagccgatccacgaggtcgtc
cggctgctcggctggccggtgctcgaggtgcccggcatcgaggccgacgacgtcatcggc
acgctcgcccagctggccgaaaagtccggccaccgggtggtgatctccaccggcgacaag
gacctggcgcagctcgtcaccgagcacgtcacgctgatcaacaccatgagccgcgagtcg
ctcgacatcgagggcgtcaaggccaagttcggcgtgccgccggaccgcatcgtcgactac
ctgacgctgatgggcgacacggtcgacaacgtgcccggcgtcgagaaggtcggccccaag
accgccgccaagtggatcgccgaacacggctcgctcgacggcgtggtggccgccgccggc
tcgatcaagggcgtggccggcgagaacctgcgccgcgcgctcgactggctgccgaccgcg
cgcaagctcgtcaccgtcaagaccgactgcgacctgagcggccacgtgcccgcgtggccg
gcgctcgaggcgctggcgctgcgcgaggtcgatcccgacggcctgagggcgttctacatg
cgcaacggcttcaggacctggacccgcgagctggaggcgcaggccccgagcgcccccgtc
atcgcttctgccgcagcccccgcgctcgacgacatggcgcaggcctcgggcaacggcgat
gcgccggcccaggctccggcgccggccgccgatggtgcggcgggtcgctacgaaaccatc
ttcaccaccgagcagctcgatgcctggatcgcgcgactgcaggccgcgccgctggtggcg
atcgacaccgagaccgactcgctcgacccgatgcgtgcccgcatcatcggcatcagcttc
gcggtgcaaccgctggaggcggcctacgtgccggtcggccacgactaccccggcgcgccc
gaccagctgccgctcgacgaggtgctggcgcgcctgcgtccctggctcgaagacgccggc
acgcgcaaggtcggccagaacatcaagtacgacagccacgtcttcgccaaccacggcgtc
acggtgcgcggctacgcccacgacaccatgctcgaaagctacgtgctcgaagcccacaag
ccgcacggcctggccagcctggccgaccgccacctcggccgcagcggcatcaactacgaa
gacctgtgcggcaagggcgccggccagatcccgttcagccacgtggcggtcgaccaggcc
agcacctactcgggcgaagacagcgagatgacgctgcaggtgcaccagacgctgtggccg
cagctcgaagccgaaccgcgcctgcgcgagctctacgaaaccatcgagatgccgagcgcc
gaggtgctggtgcgcatcgagcgcaacggcgtgctgatcgacgcgggcgtgctggcgcgc
cagagccaccagctcgcgcagcgcatgcacacgctcgaacaggaggcccatgcgattgcc
ggccagcccttcaacatgagcagccccaagcagatcggcgagatcctgttcaccaagctc
ggcctgccggtcaagaagaagaccgccagcggcgcgcccagcaccgacgaggaagtgctg
caggaactcgccgccgactacccgctgccggcgcgcatcctcgaacaccgcagcctggcc
aagctcaagggcacctacaccgacaagctgccgctgatggtcaacccgtcgaccggccgc
gtgcacaccaattacgcgcaagccgtggcgatcaccgggcggctgtcgagcaacgatccg
aacctgcagaacatccccatccgcaccgccgagggccggcgcgtgcgcgaggccttcgtc
gccgcgcccggccacaagctggtcagcgccgactactcgcagatcgagctgcggctgatg
gcgcacatctcgggcgacgccaacctgctgaaggccttcgccgacggcatggacgtgcac
cgcgccaccgccgccgaggtcttcaacatcgccgccgccgacgtcaccagcgagcagcgc
cgctacgccaagaccatcaacttcggcctgatctacggcatgggcgcgttcggcctggcg
gccagcctgggcatcgagcagaaggcggcgcgtgactacatcgagcgctacttcgcgcgt
tacccggacgtcaaacgctacatggacgagaccaaggccggcgcggcgcagctcggtcat
gtcgagacgctgttcggccgccgcatcgtgctgcccgagatcaagggcggcaacggcccg
cgcaaggccgccgccgaacgccaggccatcaacgcgccgatgcagggcaccgcggccgac
ctgatcaagctggcgatgatcgcggtgcagaaggccatcgacgacgaaggccgcgccagc
aagatgatcatgcaggtgcacgacgaactggtgctcgaggtgcccgaggccgaactcggc
tgggcgcgtgaggcgctgccgcggctgatggccggcgtggcgcagctcaaggtgccgctg
gtggccgaggtgggcgaaggggccaattgggaggaagcccattga
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