Leptothrix cholodnii: Lcho_1112
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Entry
Lcho_1112 CDS
T00681
Name
(GenBank) TRAP dicarboxylate transporter, DctM subunit
KO
K11690
TRAP-type transport system large permease protein
Organism
lch
Leptothrix cholodnii
Pathway
lch02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
lch00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Lcho_1112
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lch02000
]
Lcho_1112
Transporters [BR:
lch02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
Lcho_1112
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctM
DUF6404
Motif
Other DBs
NCBI-ProteinID:
ACB33381
UniProt:
B1Y3Y7
LinkDB
All DBs
Position
complement(1187964..1189247)
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AA seq
427 aa
AA seq
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MDAFVLIGSFVLLMMIGVPIAFSLGLAALIGALWIDIPLDAVMIQIAAGVNKFSLLAIPF
FVLAGAIMAEGGMARRLVAFAGVLVGFIRGGLSLVNILASTFFGAISGSSVADTASVGTV
LIPEMEKKGYPRDFATAVTISGSVQAILIPPSHNAVLYSLAAGGSVSIAALFMAGVLPGL
LMGLTLAVLCLMKARKHGYPKGEVIPLKQAIKISIDAMWGLMTMVIILGGILSGVFTANE
SASIAVVWAFFVTMFIYRDYKWRDLPKLVHRTVKTVTIVMILIGFAAAFGYLMTLMMIPL
RVTAFLTSLSDNKYAILAMINILLLVLGTLMDMSPLILILTPILLPVVKMLGVDPVHFGM
IMMVNLGIGLITPPVGTVLFVGAAVAKLKIGVVTRAMMPFFVALFIVLLMVTYIPWLSLW
LPRFLGL
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggatgctttcgtgctgatcggcagcttcgtgctgctgatgatgatcggcgtgccgatc
gccttttcgctcggcctggccgccctgatcggcgcgctgtggatcgacatcccgctcgac
gcggtgatgatccagatcgccgccggggtcaacaagttctcgctgctggcgatcccgttc
ttcgtgctggccggcgccatcatggccgagggcggcatggcgcgccggctggtggcgttt
gccggcgtgctggtgggtttcatccgcggcgggttgtcgctggtcaacatcctggccagc
accttcttcggcgcgatctcgggctcgtcggtggccgacaccgcctcggtcggcacggtg
ctgatccccgagatggagaagaagggctacccgcgcgacttcgccaccgcggtcaccatc
agcggctcggtgcaggcgatcctgatcccgcccagccacaacgccgtgctgtactcgctg
gccgcaggcggctcggtgtcgatcgccgcgctgttcatggccggcgtgctgccgggcctg
ctgatgggcctgacgctggccgtgctgtgcctgatgaaggccaggaaacacggctacccc
aagggcgaggtgatcccgctcaagcaggcgatcaagatctcgatcgacgcgatgtggggc
ctgatgacgatggtcatcatcctcggcggcatcctgtcgggcgtgttcacggccaacgaa
tcggcttcgatcgcggtggtctgggccttcttcgtcacgatgttcatctaccgcgactac
aagtggcgcgacctgcccaagctggtgcaccgcaccgtcaagacggtgacgatcgtgatg
atcctgatcggcttcgcggcggccttcggctacctgatgacgctgatgatgatcccgctg
cgagtcaccgccttcctcaccagcctgtcggacaacaagtacgcgatcctggccatgatc
aacatactgctgctggtgctgggcacgctgatggacatgtcgccgctgatcctgatcctc
acgccgatcctgctgccggtggtcaagatgctgggtgtcgacccggtgcacttcggcatg
atcatgatggtcaacctcggcatcggcctgatcacgccgccggtgggcacggtgctgttc
gtcggcgcagcggtggccaagctcaagatcggcgtggtcacccgggcgatgatgccgttc
ttcgtcgcgctgttcatcgtgctgctgatggtgacctacatcccctggctgtcgctgtgg
ctgccgcgtttcctgggtctttga
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