Leptothrix cholodnii: Lcho_1214
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Entry
Lcho_1214 CDS
T00681
Name
(GenBank) Extracellular ligand-binding receptor
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
lch
Leptothrix cholodnii
Pathway
lch02010
ABC transporters
lch02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
lch00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Lcho_1214
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Lcho_1214
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lch02000
]
Lcho_1214
Transporters [BR:
lch02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
Lcho_1214
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
Peripla_BP_5
ANF_receptor
Motif
Other DBs
NCBI-ProteinID:
ACB33483
UniProt:
B1Y595
LinkDB
All DBs
Position
complement(1299705..1300847)
Genome browser
AA seq
380 aa
AA seq
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MNRRHTLAIAAAGLLTALAAPIHAQEVIRIANVVELSGSGASPGTYFRDGVELAVKEINA
AGGILGRKIVTTTADTQTQPGIAKGLAAKAVDDGAFAVFGPVYSGSIMVSMAETRRAEVP
NFTGGEAAAITQQGNPYVFRTAFGQSSSFPKLARYINTKARTLVVIYQNNDFGKGGRDTL
TKLLDGGPTRIVGEMATDQGQIDFSAAVIKARQANADAVFVYLTEEESARALKELRKQGW
SKPIIGETVLVSQKVIELAGEAANGVTGHVGLTVDAPNPEMLKFKAKFYQAYKYIPDHNG
IKSYMGVYTLKAAIEKAGKLDRVAVAKAMKGLEVKAAKYPGVIMDVSFDDKGDLDRESFL
VEVKDGRQVVVATLPPLGKK
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgaacagacgccacaccctcgccatcgccgccgcaggcctgctgaccgcgctcgcggcg
ccgatccacgcgcaggaggtcatccgcatcgccaacgtggtcgagctgtcgggcagcggc
gcgagcccgggcacctatttccgcgacggcgtcgagctggcggtcaaggagatcaacgcg
gccggcggcatcctgggccggaagatcgtcaccaccaccgccgacacccagacccagccc
ggcatcgccaagggcctggctgccaaggcggtcgacgacggcgcgttcgcggtgttcggc
ccggtgtattcgggctcgatcatggtcagcatggccgagacgcgccgcgccgaagtgccc
aacttcaccggcggcgaggccgcggcgatcacgcagcagggcaacccgtacgtcttccgc
accgccttcggccagtcgagctccttccccaagctggcgcgctacatcaacaccaaggcc
cggacgctggtggtgatctaccagaacaacgacttcggcaagggcgggcgcgacaccctc
accaagctgctcgacggcggcccgaccaggatcgtcggcgaaatggccaccgaccagggc
cagatcgacttctcggccgccgtcatcaaggccaggcaggccaacgccgacgcggtgttc
gtctacctgaccgaagaagaatcggcccgcgcgctcaaggaactgcgcaagcagggctgg
agcaagcccatcatcggcgagaccgtgctggtgagccagaaggtgatcgagctggccggc
gaagcggccaacggcgtcaccggccatgtcggcctgacggtcgatgcgcccaaccccgag
atgctcaagttcaaggccaagttctatcaggcctacaagtacatccccgatcacaacggc
atcaagagctacatgggcgtctacacgctcaaggctgcgatcgagaaggccggcaagctc
gaccgcgtggcggtggccaaggcgatgaagggtctggaggtgaaggccgccaagtacccc
ggcgtgatcatggacgtgagcttcgacgacaagggcgatctcgaccgcgagagcttcctg
gtcgaagtgaaggacggccgccaggtcgtcgtggcgacgttgccgccgctgggcaagaag
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