Leptothrix cholodnii: Lcho_1224
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Entry
Lcho_1224 CDS
T00681
Name
(GenBank) TRAP dicarboxylate transporter-DctP subunit
KO
K11688
TRAP-type transport system periplasmic protein
Organism
lch
Leptothrix cholodnii
Pathway
lch02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
lch00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Lcho_1224
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lch02000
]
Lcho_1224
Transporters [BR:
lch02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
Lcho_1224
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctP
Motif
Other DBs
NCBI-ProteinID:
ACB33493
UniProt:
B1Y5A5
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All DBs
Position
1309852..1310934
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AA seq
360 aa
AA seq
DB search
MQRRSFVRQAGIAGVLAAGAAPAIVNAQANIRWRLASSFPKSLDTIYGAADEFSKKVSEL
SGGKFQISVHSGGELMPAFGVVDGVQNGTVEVAHTVPYYFFGKDETFALGACVPFGLNSR
QMTAWMLEGNGLKLMREFYAQYNMINFLGGNTGAQMGGWFRKPLTSMADMKGLKFRIGGF
AGKVLERLGGVPQNIPGGEIYQALEKGTIDAAEWIGPYDDQKLGFNKVAPHYAYPAWWEG
GPQIDFFINQKAYGALTPEYKAIIEAASMYAHVDMQAKYDGKNPVALKQLVAGGSKLFRT
PKDIMDAAFKESQALYSELSAKNPNWKKVYTDFAKFRAEQNLWFRFAEAGFDDFMQQQKL
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgcaacgtcgttccttcgttcgccaggccggtatcgccggtgttctcgccgcgggtgcc
gcaccggcaatcgtcaatgcgcaagccaacatccgctggcgcctggcgtcgagcttcccg
aagtcgctggacaccatctacggcgccgccgacgagttctccaagaaggtgtccgagctg
tcgggcggcaagttccagatctcggtgcacagcggcggtgagctgatgcccgcgttcggc
gtggtcgacggcgtccagaacggcacggtcgaggtggcgcacacggtgccctattacttc
ttcggcaaggacgagaccttcgcgctcggcgcttgcgtgccgttcggcctcaacagccgt
cagatgaccgcctggatgctcgaaggcaacggcctgaagctgatgcgcgagttctacgcg
caatacaacatgatcaacttcctgggcggcaacaccggcgcccagatgggcggctggttc
cgcaagccgctgacctcgatggccgacatgaagggcctgaagttccgcatcggcggtttc
gccggcaaggtgctcgagcgcctgggcggcgtgccgcagaacatccccggtggcgagatc
taccaggcgctcgaaaagggcaccatcgacgcggccgaatggatcggcccctatgacgac
cagaagctcggcttcaacaaggtggcgcctcactacgcctatccggcctggtgggaaggc
ggcccgcagatcgacttcttcatcaaccagaaggcctacggcgcactgacgcccgagtac
aaggccatcatcgaagccgcttcgatgtacgcacacgtcgacatgcaggccaagtacgac
ggcaagaacccggtagcgctcaagcagctggtggccggcggcagcaagctgttccgcacg
cccaaggacatcatggacgcggccttcaaggaatcgcaggccctgtacagcgagctgtcg
gccaagaacccgaactggaagaaggtctacaccgacttcgccaagttccgcgccgagcag
aacctgtggttccgctttgccgaagccggcttcgacgacttcatgcagcagcagaagctg
taa
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