Leptothrix cholodnii: Lcho_1248
Help
Entry
Lcho_1248 CDS
T00681
Name
(GenBank) Deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
lch
Leptothrix cholodnii
Brite
KEGG Orthology (KO) [BR:
lch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lch03400
]
Lcho_1248
Enzymes [BR:
lch01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
Lcho_1248
DNA repair and recombination proteins [BR:
lch03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
Lcho_1248
Prokaryotic type
Lcho_1248
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
DUF1707
Motif
Other DBs
NCBI-ProteinID:
ACB33517
UniProt:
B1Y5C9
LinkDB
All DBs
Position
complement(1335681..1337162)
Genome browser
AA seq
493 aa
AA seq
DB search
MSRAVVWFKRDLRVTDHAPLAEAARCDAALALFIIEPAWLDSPECHPRHVTWLLKCLAPL
RDALAARGLPLLVRTGEAVEVLAALRREFACTRLFSHEETGPGWSYARDRAVARWCRAHG
VAWTEWPQTGVIRRLKDRRGWAGRWQQRMDAPCVRVPAGWRAAPGFAPSTLPADLPTLRE
LGVATAPDTPPAGEAAAQQMLQSFLGGRALGYRRHLSSPLAAEAGCSRLSEHLAFGTLSL
RMLHQATEATLRATSDRELAYSLRGFAGRLRWHCHFMQKLEDEPAIEWRNFARSADGLRP
GDGSALQTADRERLQAWCEGRTGFPMVDACMRQLRATGWLNFRMRAMLVSFAAYHLWLHW
REPGLFLARQFLDFEPGIHWSQMQMQSGTTGINTLRIYSPAKQALDHDPQGEYVRRWVPE
FGSAAYPAPIVDERAAVAAAKQRLYGLRQTPEAHDEAGAIQHKHGSRKSGLPPSGNRPTR
RTRAADDGQGRLF
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgagccgcgctgtcgtctggttcaagcgcgacctgcgcgtgaccgaccacgcgccgctg
gccgaggccgcacgctgcgacgccgcgctggcgctgttcatcatcgaacccgcctggctg
gacagccccgagtgccacccgcgacacgtcacctggctgctcaagtgcctggcacccctg
cgcgacgcgctggccgcacgcggcctgccgctgctggtgcgcacgggcgaggcggtcgag
gtgctggcggcgctgcggcgcgaattcgcctgtacgcggctgttcagccacgaagagacc
ggcccgggctggagctacgcgcgcgaccgggccgtggcgcgctggtgccgtgcgcacggc
gtggcctggaccgagtggccacagaccggcgtgatccgccgcctgaaagaccgccgcggc
tgggccggccgctggcagcagcgcatggacgcgccgtgcgtgcgcgtgccggcgggctgg
cgcgccgcaccgggcttcgcaccatctacgctgccggccgacctgcccacgctgcgcgag
ctgggcgtggccaccgcgcccgacacgccaccggccggcgaggcggcggcgcagcagatg
ctgcagagcttcctcggcggccgcgcgctcggctatcggcgccatctgtcgagtccgctc
gcggcagaagccggctgcagccggttgtcggaacacctcgccttcggcacgctgtcgttg
cgcatgctgcaccaggccaccgaggccaccttgcgcgccaccagcgaccgcgaactggcc
tacagcctgcgcggcttcgccggccgcctgcgctggcactgccacttcatgcagaagctg
gaggacgagccggcgatcgagtggcgcaacttcgcgcgcagcgccgacggcctgcgaccc
ggcgacggcagcgcgctgcagaccgccgaccgcgagcgcctgcaggcctggtgcgaaggc
cgcaccggcttcccgatggtcgacgcctgcatgcgccagctgcgcgccaccggctggctg
aacttccgcatgcgggcgatgctggtcagcttcgcggcctatcacctgtggctgcactgg
cgcgagccggggctgttcctcgctcgccagtttctcgacttcgagcccggcatccactgg
agccagatgcagatgcagtccggcaccaccggcatcaacacgctgcgcatctactcgccg
gccaagcaggcgctcgatcacgatccacagggcgagtacgtccgccgctgggtgcccgag
ttcggcagcgccgcctacccggcgccgatcgtcgacgaacgcgctgcggtggctgccgcc
aagcagcggctctacggcctgcgccagacacccgaggcccatgacgaagccggcgccatc
cagcacaagcacggctcgcgcaagagcggcctgccgccatcgggcaaccggccgacccga
cgcacccgcgcagccgacgacgggcaaggtcggttgttctga
DBGET
integrated database retrieval system
