Leptothrix cholodnii: Lcho_1249
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Entry
Lcho_1249 CDS
T00681
Name
(GenBank) Deoxyribodipyrimidine photolyase-like protein
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
lch
Leptothrix cholodnii
Brite
KEGG Orthology (KO) [BR:
lch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lch03400
]
Lcho_1249
Enzymes [BR:
lch01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
Lcho_1249
DNA repair and recombination proteins [BR:
lch03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
Lcho_1249
Prokaryotic type
Lcho_1249
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
ACB33518
UniProt:
B1Y5D0
LinkDB
All DBs
Position
complement(1337194..1338456)
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AA seq
420 aa
AA seq
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MSDLLDHRLEDSPAPWADTLPPTRSAALARIARVRPAAYARTRNHLDGAVTGLSPYLTHG
LITLPEVLAGVLQRERLEVRHKLVFELGWREFFRHAWGHAGDAILQSLHTGPRPDETCAP
VLPADIRQARTGVPVIDEAVRTLYATGTLHNHARMWLASYVVHLRHVHWRAGADWLVAHL
LDGDLASNHLSWQWVAGTGSHKPYLFNADNVACYAPAHWHSAGTVIDQSYEALDRIARSA
TPTAAPGPASRAPMAETAATPEPPLLAAPPAGLGLRVPDAACAERLRGREVWLVHPWALR
APPADLPDGAVRIGVYLREHHQAWPWPESRWRWVDTAMAAVTAQRWFVDAAGLANALAGA
ARVRSVDDPHLTRWLRPVAQLDAAPTLFPPVARRCESFSQWWTRATRGLHHAEELLCSRD
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacctgctggaccaccgactcgaagacagcccggcgccctgggccgacacgctg
cccccgacgcgcagcgcggcgttggcgcgcatcgcccgcgtgcggcccgccgcctacgcg
cgcacccgcaaccacctcgacggcgcggtgacgggcctgtcaccctacctgacgcacggc
ctgatcacgctgcccgaggtgctggccggcgtgctgcagcgcgagcggctggaggtgcgg
cacaagctggtgttcgagctgggctggcgcgagttcttccgccatgcctggggccacgcg
ggcgacgccatcctgcagtcgctgcacaccggcccgcgcccggatgaaacctgcgcgccg
gtgctgccggccgacatccgccaggcgcgcaccggcgtgccggtcatcgacgaggcggtg
cgcacgctctacgcgaccggcacgctgcacaaccacgcccgcatgtggctggccagctac
gtggtgcacctgcgtcacgtgcactggcgcgcgggcgccgactggctggtggcgcacctg
ctcgacggcgatctggccagcaaccacctcagctggcagtgggtggccggaaccggcagc
cacaagccgtatctcttcaacgccgacaacgtggcgtgctacgcgcccgcccactggcac
agcgccggcaccgtgatcgaccagtcctacgaggcgctggaccgcatcgcccgcagcgcc
acgccgacagccgcccccggcccggcctcccgtgcgccgatggccgagacagccgccacg
cccgagccgccgctgctcgccgcaccacccgccggcctggggctgcgcgtgcccgatgcc
gcctgcgccgagcggctgcgcgggcgcgaggtctggctggtgcacccgtgggcgctgcgt
gcgccgccggccgacctgcccgacggtgccgtgcggatcggcgtgtacctgcgcgaacac
caccaggcctggccctggcccgagtcacgctggcgctgggtcgacacggcgatggctgcg
gtgactgcgcaacgctggttcgtcgacgccgccggcctggccaacgcgctggcgggcgcg
gcgcgcgtgcgcagcgtcgacgacccgcacctcacgcgctggctccggcccgtggcgcag
ctggacgcggcaccgacgctgttcccgccggtggcgcggcgctgcgagagcttctcgcag
tggtggacccgcgccacgcgcggtctgcaccatgccgaggagctgctgtgcagccgcgac
tga
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