Leptothrix cholodnii: Lcho_1562
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Entry
Lcho_1562 CDS
T00681
Name
(GenBank) putative exonuclease RdgC
KO
K03554
recombination associated protein RdgC
Organism
lch
Leptothrix cholodnii
Brite
KEGG Orthology (KO) [BR:
lch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lch03400
]
Lcho_1562
DNA repair and recombination proteins [BR:
lch03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Lcho_1562
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RdgC
Motif
Other DBs
NCBI-ProteinID:
ACB33829
UniProt:
B1XWG1
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All DBs
Position
complement(1659144..1660157)
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AA seq
337 aa
AA seq
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MFKNLLIHRLAALPAADAVQAEEALVAQCFVPCGASQPVSLGWVPPRGEAHGPLLEIIGG
HWLMRLMIEQKMLPGAVVKRRCDEMAQRIEADTGRKPGKKQRKELKDQAMLELLPQAFTR
QMSLPVWIAPEQRLVMVDTASAGKADEVISLLTKGLPGLAVEPLHTALSPAAAMADWLLS
GEPPAEFSVDRECELKSADEMKSVVRYARHPLDTDEVRAHIQLGKRPTRLALTWKGRVSF
VLTDAMQVKKLEFLDGVYEGQPQASRDEAFDADAAIATGELVRLIPDLIEALGGEQQPGQ
MADDGVPALATAPKTVAPPAAFTSATDAGPVGDDPPW
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
gtgttcaagaatctgttgatccaccgcctggccgccctgccggcggccgatgccgtgcag
gccgaagaggcgctggtcgcccagtgtttcgtgccctgcggcgccagccagccggtctcg
ctgggctgggtgcccccgcgtggcgaggcccacgggccgctgctggagatcatcggcggc
cactggctgatgcggctgatgatcgagcagaagatgctgcccggcgcggtggtcaagcgc
cgctgcgacgagatggcgcagcgcatcgaggccgataccggccgcaagcccggcaagaag
cagcgcaaggagctcaaggaccaggccatgctggaactgctgccgcaggccttcaccagg
cagatgtcgctgccggtctggatcgcgcccgagcagcgcctggtgatggtcgacaccgcc
agcgccggcaaggccgacgaggtcatcagcctgctgaccaagggcctgcccggcctggcg
gtcgagccgctgcacaccgcgctgtcgccggccgcggcaatggccgactggctgctcagc
ggcgagccgccggccgagttcagcgtcgaccgcgagtgcgagctgaagtcggccgacgag
atgaaatcggtggtgcgctacgcccgccacccgctcgacaccgacgaggtgcgcgcccac
atccagctcggcaagcgcccgacgcgcctggcgctgacgtggaagggccgggtctcgttc
gtgctgacggacgcgatgcaggtcaagaagctcgagttcctggacggcgtctacgaaggc
cagccgcaggccagccgcgacgaggccttcgacgccgatgcggccatcgccaccggcgag
ctggtgcggctgatcccggacctgatcgaggcgctgggcggcgagcagcagccggggcag
atggccgatgacggtgtgccggccttggccacggcgccgaagaccgtggcgccgcccgct
gcgttcacgtcggcgaccgacgccggcccggtgggcgacgatccgccgtggtga
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