Leptothrix cholodnii: Lcho_1680
Help
Entry
Lcho_1680 CDS
T00681
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
lch
Leptothrix cholodnii
Brite
KEGG Orthology (KO) [BR:
lch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lch03016
]
Lcho_1680
Enzymes [BR:
lch01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
Lcho_1680
Transfer RNA biogenesis [BR:
lch03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Lcho_1680
Prokaryotic type
Lcho_1680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
ACB33947
UniProt:
B1XY46
LinkDB
All DBs
Position
1792948..1793736
Genome browser
AA seq
262 aa
AA seq
DB search
MRLALGLSYRGSAYRGWQSQTNGATVQDVLEAALCRFAATPIRVSCAGRTDAGVHALNQV
VHLDTDRDREPFSWVRGTNTYLPPDVAVQWCRPVPDAFHARNAARARRYAYVLLESPVRP
AMEAGQVGWIFRPLDQARMEASAALLIGEHDFSAFRSADCQALSPVKQMRTIRIGRHGPY
WRFDFEASAFLHHMIRNLMGCLIAVGTGARDPAWLAGVLASRDRRLAAPTFSPDGLYFLG
PRYDAELVLPEHTPAFDWLPGA
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
ttgcgtctggcgctgggcctgagctaccgcggatcggcctacaggggctggcagagccag
accaacggggcgaccgtccaggatgtgctcgaagcggccttgtgccgctttgccgccacg
ccgatccgcgtcagctgcgccgggcgcaccgatgcgggggttcacgcgctcaatcaggtc
gtccacctcgataccgatcgcgaccgcgagcccttttcgtgggtccgtggcaccaacacc
tacctgccgccggacgtggcggtccagtggtgtcggcctgtgcccgatgccttccatgcc
cgcaatgcggcgcgagcccggcgctatgcctatgtgctgctcgagtcgccggtgcgtccg
gcgatggaggccgggcaggtcggctggatcttccgcccgctggatcaggcgcgcatggag
gcctctgcggccttgctgatcggcgagcacgacttctcggctttccggtcggccgattgc
caggcgctgtcgccggtcaagcagatgcgcaccatccggatcggccggcatggcccgtac
tggcgcttcgatttcgaggcttccgcgttcctgcaccacatgatccgcaacctgatgggg
tgcctgatcgcggtcggcaccggtgcacgcgatccggcctggctcgccggggttctggcg
tcgcgtgaccgccggctggcggcgccgaccttttctcccgacgggctgtattttctgggc
ccgcgctacgatgccgagcttgttctgcccgagcacacacccgctttcgactggctgccg
ggggcctga
DBGET
integrated database retrieval system
