Leptothrix cholodnii: Lcho_1700
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Entry
Lcho_1700 CDS
T00681
Name
(GenBank) NusA antitermination factor
KO
K02600
transcription termination/antitermination protein NusA
Organism
lch
Leptothrix cholodnii
Brite
KEGG Orthology (KO) [BR:
lch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lch03021
]
Lcho_1700
03009 Ribosome biogenesis [BR:
lch03009
]
Lcho_1700
Transcription machinery [BR:
lch03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
Lcho_1700
Ribosome biogenesis [BR:
lch03009
]
Prokaryotic type
rRNA transcription factors
Lcho_1700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
S1
KH_2
KH_NusA_C
Thymosin
KH_KhpA-B
KH_1
Prot_ATP_ID_OB_C
Motif
Other DBs
NCBI-ProteinID:
ACB33967
UniProt:
B1XY66
LinkDB
All DBs
Position
1814675..1816153
Genome browser
AA seq
492 aa
AA seq
DB search
MNRELLMLVDAISREKNVDREVVFGAVEAALASATKKLYEGEVDIRVAVDRDTGVYETFR
RWHVVPDEAGLQLPEAEILHFEAKEQIDDIEVDDYLEESVESVPIGRIGAQAAKQVILQK
IRDAEREQLLNDFMSRGEKIFVGTVKRLDKGDLVVESGRVEGRLRRSELIPKENLRTGDR
VRAIIVEVDPTLRGPQIVLSRSAPEFMIELFRLEVPEIEQGLLEIKSCARDSGSRAKIAV
VSHDRRVDPIGTCVGVRGSRVNAVTNELAGERVDIVLWSEDPAQFVIGALAPANVQSIVV
DEEKHAMDVVVDEENLAIAIGRGGQNVRLASELTGWRINIMTAEESQAKQATESDSIRKL
FVDKLDVDEDVADILIAEGFTSLEEVAYVPMQEMLEIESFDEDTVHELRTRAKDALLTME
IVNEEKVDEVSQDLRDLEGLNAELIGKLSDGGIHTRDDLADLAVDELTEMTGIDDNAAKA
LILKAREHWFTA
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgcgaattgttgatgctggtggacgcgatctcgcgtgagaagaacgtcgaccgc
gaggtggtgttcggcgctgtcgaggctgcgctggcctctgccaccaagaagctttatgaa
ggcgaggtcgacatccgtgtcgccgtcgatcgtgacaccggggtctacgagaccttccgc
cgctggcacgtcgttcccgacgaggccggtctgcagctgcccgaggccgagatcctgcat
ttcgaggccaaggaacagatcgacgacatcgaggtggacgactacctcgaggaatcggtc
gagtcggtgccgatcggccgcatcggtgcacaggctgccaagcaggtgatcctgcagaag
atccgcgacgccgagcgcgagcagctgctcaacgacttcatgtcgcgtggcgagaagatc
ttcgtcggcaccgtcaagcgcctcgacaagggcgatctggtggtcgagagcgggcgcgtc
gagggccgcctgcggcgcagcgagctgatcccgaaggaaaacctgcgcaccggtgatcgc
gtgcgcgccatcatcgtcgaggtcgatccgaccctgcgtggtccgcagatcgtgctgtcg
cgctcggcgcccgaattcatgatcgagctgttccgcctggaagtgcccgagatcgaacaa
ggcctgctcgagatcaagagctgcgcgcgtgactccggttcgcgcgccaagatcgccgtg
gtctcgcatgaccggcgcgtcgatccgatcggcacctgcgtcggcgtgcgcggctcgcgt
gtcaatgccgtcaccaacgaactggcgggcgagcgggtcgacatcgtgctgtggtcggaa
gatccggcgcagttcgtgatcggcgcgctggctccggcgaacgtgcagtcgatcgtcgtc
gacgaggaaaagcatgcgatggacgtggtggtcgacgaggaaaacctcgcgatcgcgatc
ggtcgcggtggccagaacgtgcggctggcgtccgagctgaccggctggcgcatcaacatc
atgacggccgaagaatcgcaggccaagcaggccaccgagagcgactcgatccgcaagctc
ttcgtcgacaagctcgacgtcgacgaggatgtggccgacatcctgattgccgagggcttc
accagcctcgaagaagtggcctacgtgccgatgcaggaaatgctcgagatcgagtcgttc
gacgaagataccgtgcacgagctgcgcacccgcgccaaggatgccctgctgacgatggaa
atcgtcaacgaggagaaggtcgacgaggtgtcgcaggatctgcgtgatctcgagggcctg
aatgccgagctgatcggcaagctctccgatggtggcatccacacacgtgacgatctggcc
gatctggctgtcgacgagttgaccgaaatgaccggcatcgacgacaacgccgccaaggcc
ctgatcctcaaggcccgtgaacattggttcacggcctga
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