Leptothrix cholodnii: Lcho_1703
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Entry
Lcho_1703 CDS
T00681
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
lch
Leptothrix cholodnii
Brite
KEGG Orthology (KO) [BR:
lch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lch03016
]
Lcho_1703
Enzymes [BR:
lch01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Lcho_1703
Transfer RNA biogenesis [BR:
lch03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Lcho_1703
Prokaryotic type
Lcho_1703
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
ACB33970
UniProt:
B1XY69
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All DBs
Position
1819668..1820687
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AA seq
339 aa
AA seq
DB search
MNAVLDAQANAATGARRTDAPTRVRLPRRPVHGVLLLDKPIGWTSNDALQKVKNLLRAEK
AGHTGTLDPLATGLLPLCFGAATKFSQVSLEADKAYRATVRLGQRTEGGDREGAVIEERP
VQVDRALIEAACARLTGKLMQMPPMHSALKHQGKALYEYARAGITVERAPREVTLHSIDI
VEWQAVTPEHLVIDVSCSKGTYIRTLAEDLGELLGCGAHLAALQRTGSGPAQLADAISLE
ALLACTEAQREARLLPPDVLLRHWPALHLQADDAGRFLSGMRRRVDHPDANDVRVYGPHG
QTFLGSAHITAGELIADRLLSPLEVQAQLPVAATPTLTP
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgccgtgctcgacgcccaagccaacgccgccaccggtgcccgccgcaccgatgcg
ccgacgcgcgtgcgcctgccgcggcgtccggtgcacggcgtgctgctgctcgacaagccg
atcggctggaccagcaacgacgcgctgcagaaggtcaagaacctgttgcgcgccgagaag
gccggccacaccggcacgctcgacccgctggccaccggcctgctgccgctgtgtttcggt
gcggcgaccaagttctcgcaggtcagcctggaggccgacaaggcctaccgcgcgaccgtg
cggctgggccagcgcaccgaaggcggcgaccgcgaaggcgcggtgatcgaggagcgcccg
gtgcaggtcgaccgcgccctgatcgaggccgcctgcgcgcgcctgaccggcaagctcatg
cagatgccgccgatgcattcggcgctcaagcaccagggcaaggccctctacgaatacgcg
cgcgccggcatcaccgtcgagcgcgcaccgcgtgaggtgacccttcacagcatcgacatc
gtcgaatggcaagctgtcacacccgaacacctggtgatcgacgtgagctgcagcaagggc
acctacatccgcacgctggccgaagacctcggcgagctgcttggctgtggggcgcacctg
gccgcgctgcagcgtaccggcagcgggccggcccagctggctgatgcgatcagcctcgag
gccttgctcgcctgcaccgaagcgcaacgcgaggcgcggctgctgccgcccgacgtgttg
ttgcgccactggccggcattgcacttgcaagctgacgatgcgggccgctttttgtccggc
atgcgccgccgcgttgaccaccccgatgcgaacgacgtgagggtctacggcccgcacggc
cagacgttcctcggtagcgcccacatcaccgccggcgagctgatcgccgaccggctcctg
agtcccttagaagtacaggcgcaactgcccgtcgcagccacgccaaccctcaccccatga
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