Leptothrix cholodnii: Lcho_1758
Help
Entry
Lcho_1758 CDS
T00681
Name
(GenBank) type I secretion system ATPase
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
lch
Leptothrix cholodnii
Pathway
lch02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lch00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Lcho_1758
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lch02000
]
Lcho_1758
02044 Secretion system [BR:
lch02044
]
Lcho_1758
Transporters [BR:
lch02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
Lcho_1758
Secretion system [BR:
lch02044
]
Type I secretion system
Adhesin protein transporter
Lcho_1758
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_21
Peptidase_C39
AAA_29
AAA_18
Neur_chan_memb
Motif
Other DBs
NCBI-ProteinID:
ACB34025
UniProt:
B1XZ06
LinkDB
All DBs
Position
1886126..1888465
Genome browser
AA seq
779 aa
AA seq
DB search
MSSSRASDPAAAPGPAIAAPDAAPEGAVPSDDALLSAVLWLCRHHGIDRTPHSLLSGLGI
SQLLTPPLAVRVLQEAGFNASVVDREPRQILALLLPAILLLKNGDACVLLERVVRGKDLR
YRILMPPADAGDAPVEVLASEDELLQEYSGYVLMATPRLGATATANRAAIDDMLVPGRHW
LWGTLRRFMPYYRGAMLAALLSNVLMLFIGLFTSVVYDRVIPHKAFVTLWSLAAGAGLAI
VFDLIARQLRSHLIDLAGKKADLALGAILFRKALSIRLENRPESSGSFAHQLAQLEVVRD
FSTSATMSAISDLPFIVLFMAMIWFVAGELVVVMLVAVPLVLLLAVAVQQVLRRSMTANQ
RQMADMQGLLIETMEGMEAVRAASAQGHFQRQYEESNAMAAQTSLRSRALMSWVNNATMV
SQQLITVVMLVWGVHLIADNQLTAGALISAVMFAGRVVAPLGGVVSLASRYQGARAALRV
LDNLMAQPSEREEGRRYLPRSAIRGQLGLRDVSFQYQAPQAMGQAPGPTVLKGINLRIEA
GERVAILGKIGSGKSTVLRLLAGLYMPTEGYTEVDGIDLRQIDPADYRAQVGFVAQEPRL
FRGSLRDNILLSRPHAGADTLAEVLRLTGLDRVAAAHPSGIDLPVGEGGNMLSGGQRQLV
ALARCLVTQPQVLLMDEPTSSMDAQSEAQFIAQLKQTMGSRTMVAVTHRPALLEVVDRIV
VIDAGKVVIDGPKQQVLAALAGGGAPRQAVGQAAGRAVGMEAAPAQPPSAQRPPFSVVT
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcgtcccgcgcgtccgatcccgccgccgctccgggcccggccattgccgccccg
gatgccgcgccggaaggtgccgtgccgagcgacgacgcgctgctgtcggcggtgctctgg
ctgtgccgccaccacggcatcgaccgcacgccgcactcgctgctgtcgggtctgggcatc
tcgcagctgctgaccccgccgctggcggtgcgggtgctgcaggaggccggcttcaacgcc
agcgtggtcgaccgcgagccgcgccagatcctggccctgctgctgccggcgatcctgctg
ctcaagaacggcgacgcctgcgtgctgctcgagcgcgtggtgcgcggcaaggacctgcgc
taccgcatcctgatgccgccggccgacgccggcgatgcgccggtcgaggtgctggccagc
gaggacgagctgctgcaggagtattccggctacgtgctgatggccacgccgcgcctgggc
gccaccgcgactgccaaccgcgccgccatcgacgacatgctggtgcccggccgccactgg
ctgtggggcacgctgcggcgcttcatgccctattaccgcggcgccatgctggcggcgctg
ctgagcaacgtgctgatgctgttcatcggcctgttcacctcggtggtctatgaccgggtg
atcccgcacaaggccttcgtcacgctgtggtcgctggccgccggcgccgggctggcgatc
gtcttcgacctgatcgcgcgccagctgcgcagccacctgatcgacctggccggcaagaag
gccgacctcgcgctgggtgcgatcctgttccgcaaggcgctgtcgatccggctcgagaac
cggccggaatcgtcgggctcgtttgcgcaccagctcgcgcagctcgaggtggtgcgcgat
ttctcgacctcggcgacgatgtcggcgatcagcgacctgccgttcatcgtgctgttcatg
gccatgatctggttcgtcgccggtgaactggtggtggtgatgctggtggcggtgccgctg
gtgctgttgctggcggtggcggtgcagcaggtgctgcgccgctcgatgaccgccaaccag
cgccagatggccgacatgcagggcctgctgatcgagaccatggaaggcatggaggcggtg
cgcgcagccagcgcgcagggccatttccagcgccagtacgaggagagcaacgcgatggcg
gcgcagacctcgctgcgctcgcgcgcgctgatgagctgggtcaacaacgccacgatggtg
tcgcagcagctgatcacggtggtgatgctggtgtggggcgtgcacctgatcgccgacaac
cagctgacggccggtgcgctgatctcggcggtgatgttcgccggccgggtggtggcaccg
ctgggtggcgtggtcagcctggcgtcgcgctaccagggcgcgcgcgccgcgctgcgcgtg
ctcgacaacctgatggcccagccgagcgaacgcgaggaaggccggcgctacctgccgcgc
agcgcgatccgcggccagctgggcctgcgcgacgtcagcttccagtaccaggccccgcag
gcgatgggtcaggcgcccggtccgaccgtgctcaagggcatcaacctgcgcatcgaggcc
ggcgagcgggtggccatcctgggcaagatcggcagcggcaagtcgaccgtgctgcgcctg
ctggccgggctctacatgcccaccgagggctacaccgaggtcgacggcatcgacctgcgt
cagatcgacccggccgactaccgcgcccaggtcggtttcgtggcgcaggagccgcggctg
ttccgcggcagcttgcgcgacaacatcctgctcagccgcccgcatgccggcgccgacacg
ctggccgaggtgctgcgcctgaccgggctcgaccgtgtcgccgccgcgcacccgtcgggc
atcgacctgccggtgggcgagggcggcaacatgctgtcgggcggccagcgtcagctcgtc
gcgctggcgcgctgcctggtgacgcagccgcaggtgctgctgatggacgagccgaccagc
tcgatggacgcgcagagcgaggcccagttcatcgcccagctcaagcagacgatgggcagc
cgcacgatggtggcggtgacgcaccgcccggcgttgctcgaggtggtggaccgcatcgtc
gtgatcgacgccggcaaggtggtgatcgacggccccaagcagcaggtgctggcggcgctg
gccggcggtggcgcgccgcggcaggcggtcggccaggcggccggtcgtgccgtgggcatg
gaggcggcgccggctcagccaccgagcgcgcagcgaccgccgttcagcgtggtgacctga
DBGET
integrated database retrieval system
