Leptothrix cholodnii: Lcho_1761
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Entry
Lcho_1761 CDS
T00681
Name
(GenBank) type I secretion system ATPase
KO
K12536
ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
Organism
lch
Leptothrix cholodnii
Pathway
lch02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lch00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Lcho_1761
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lch02000
]
Lcho_1761
02044 Secretion system [BR:
lch02044
]
Lcho_1761
Transporters [BR:
lch02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
Lcho_1761
Secretion system [BR:
lch02044
]
Type I secretion system
Multiple protein transporter
Lcho_1761
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_21
AAA_29
DUF87
RsgA_GTPase
NACHT
AAA_22
AAA_16
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
ACB34028
UniProt:
B1XZ09
LinkDB
All DBs
Position
complement(1891389..1893110)
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AA seq
573 aa
AA seq
DB search
MKSLLRTVAGFSMAINLLWLGPALFSLQVFDRVLTSQSQETLLVLLLGLAIALVLVGALD
FLRGRLQGVLGNIVNDAMAPEIARLSLAVAARRQGAFTNEALRDVGRLRALFSSQGLVAV
MDAPWALIFIAVIAVANLWLGLAALLSAVLMLGLAYANDRMTKQSIEKLQKDAGASQRFL
DQAMVNAEVAQAMGMADALVGRWNALSAKVADLQDPVAQRSVAMASATRIARQLTQVLMT
ALGAWLVIRGEATPGVLIASNMLLGRALQPVEQIVGSWKIMAEGRLAWRRLDPLMSEAFN
RRPQMALPAPNGQLSTTGLVFRPQGSERTLLMGVSIRLEAGESLAILGPSGAGKSTLVRL
LIGLWAPSQGHVRLDGVDLSRWTREQIGPHIGYMPQDVELFAGSVADNIARMGPVDPGLV
VEAAQLAGVHELVLGLPDGYDTQVDPNAALLSPGQRQRIALARALYGNPKLVVLDEPNAN
LDGAGELALAETLKRLQGKATVVVVTHRQTLTQHVHKMLVIEGGRQTHFGRTDEVLAALR
GGHAPAGGQVVSLARAAQAAQAAQAAPAAQAKV
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcacttctgcgcaccgtcgccggcttttcgatggcgatcaacctgctctggctc
ggcccggcgctgttcagcctgcaggtgttcgaccgcgtgctgaccagccagagccaggaa
acgctgctggtgctgctgctcgggctggcgatcgcgctggtgctggtcggcgcgctcgac
ttcctgcgcggccggctgcagggcgtgctcggcaacatcgtcaacgacgcgatggcgccc
gagatcgcccgcctctcgctggcggtggccgcgcgtcgccagggcgccttcaccaacgag
gcgctgcgcgacgtcggccggctgcgcgcgctgttctcgtcgcaaggcctggtggcggtg
atggacgcgccctgggcgctgatcttcatcgccgtgatcgcggtggcgaacctgtggctg
gggctggccgcgctgctcagcgcggtgctgatgctgggcctggcctatgcgaacgaccgc
atgaccaagcaatcgatcgagaagctgcagaaggacgccggcgccagccagcgctttctc
gaccaggccatggtcaacgccgaggtggcgcaggcgatgggcatggccgacgcgctggtc
gggcgctggaacgcgctcagcgccaaggtcgccgacctgcaggacccggtcgcgcagcgc
tcggtggcgatggcctcggccacccgcatcgcccgtcagctgacgcaggtgctgatgacc
gcgctgggcgcctggctggtgatccgcggcgaggccacgccgggcgtgctgatcgcgtcg
aacatgctgctgggccgcgcactgcagccggtcgaacagatcgtcggcagctggaagatc
atggccgaagggcgactggcctggcgccgcctcgatccgctgatgagcgaggccttcaac
cgccggccgcagatggcgctgccggcgccgaacggccagctcagcacgacggggctggtg
tttcgcccgcagggcagcgagcgcacgctgctgatgggcgtgtcgatcaggctcgaagcc
ggcgagtcgctcgccatcctcggccccagcggcgccggcaagagcacgctggtgcggctg
ctgatcggactgtgggcgccgagccagggccatgtgcgcctggacggggtcgacctgtcg
cgctggacgcgcgagcagatcggcccgcacatcggctacatgccgcaggacgtcgagctg
tttgccggcagcgtggccgacaacatcgcccgcatgggcccggtcgacccgggcctggtg
gtcgaggcggcccagctcgccggcgtgcacgaactcgtcctcggcctgcccgacggctac
gacacccaggtcgacccgaacgcggcgctgctgtcacccggacagcggcaacgcatcgcg
ctggcgcgtgcgctgtacggcaatccgaagctggtggtgctcgacgaacccaacgccaac
ctcgacggcgccggtgaactggcactggccgagaccctcaagcgcctgcagggcaaggcc
accgtggtggtggtgacgcaccgccagacgctgacccagcacgtgcacaagatgctggtc
atcgaaggcggccggcagacccatttcggccgcaccgacgaggtgctcgccgccctgcgt
ggcggccacgcgcccgccggtggccaggtcgtgtcgctggcccgtgcggcgcaagccgcc
caggcagcccaagcggcccccgccgctcaagccaaggtctga
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