Leptothrix cholodnii: Lcho_2019
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Entry
Lcho_2019 CDS
T00681
Name
(GenBank) ATP-dependent chaperone ClpB
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
lch
Leptothrix cholodnii
Brite
KEGG Orthology (KO) [BR:
lch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
lch03110
]
Lcho_2019
Chaperones and folding catalysts [BR:
lch03110
]
Heat shock proteins
HSP100
Lcho_2019
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
AAA
AAA_5
Clp_N
AAA_22
AAA_16
Sigma54_activat
AAA_14
ATPase_2
IstB_IS21
nSTAND3
bpMoxR
NBD_SMAX1
AAA_7
TniB
ABC_tran
AAA_25
AAA_24
DUF815
NACHT
AAA_19
T2SSE
TrwB_AAD_bind
zf-C4H2
Motif
Other DBs
NCBI-ProteinID:
ACB34286
UniProt:
B1Y1I7
LinkDB
All DBs
Position
complement(2190970..2193567)
Genome browser
AA seq
865 aa
AA seq
DB search
MRLDKLTTAFQQALADAQSLAINRDNPYIEPAHLLAAMLAMQDGPKALLDRAGANTAALK
TAMDTLIRGLPQVEGSGQSVQPGRDLLALLQAAEKDAGKRGDQFVSSELFLLAVADSKSD
IGGVVRGHGLTRKALEAAIDAVRGGATVDNAEAEGQREALKKYTLDLTERARMGKLDPVI
GRDDEIRRAIQVLQRRSKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLKNKRVLVLD
MAGLLAGAKYRGEFEERLKAVLKEVAADEGRIILFIDELHTMVGAGKAEGAIDAGNMLKP
ALARGELHCIGATTLNEYRKYVEKDAALERRFQKVLVDEPSVEATVAILRGLQEKYEVHH
GVQITDPAIIAAAELSHRYVTDRFLPDKAIDLIDEAAAKIKIEMDSKPESMDKLDRRLIQ
LKIEREAVRKEKDEGSVRRFGLIEEEIAKLEREAADLEEIWKAEKAAAQGSKQFMEEIES
ARLQIEEFKRKGDFNRVAELQYGKLPELEKKLHDAQAKEAGKAKGGQGPQLLRTVVGAEE
IAEVVSRATGIPVAKLMQGERDKLLQMEGKLHDRVVGQSEAIIAVSNAIRRSRAGLSDPN
RPLGSFLFLGPTGVGKTELCKALAGFLFDSDDHMIRIDMSEFMEKHSVSRLIGAPPGYVG
YDEGGYLTEAVRRKPYSVLLLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIV
MTSNLGSHQIMQMAGQDTELIREAVWAEVKQHFRPEFLNRIDEAVVFHALDQKHIEAIAQ
IQLKALAARLGKMEMTLEVSPEALAELAKVGFDPVFGARPLKRAIQQRIENPVAKLILEG
RFGPKDVVPVNVGATGDFEFGRTVH
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atgcgactcgacaagctcacgactgctttccaacaagccctggccgacgcgcagagcttg
gccatcaaccgcgacaacccctacatcgaaccggcccacctgttggcggcgatgctggcg
atgcaggacggcccgaaggccttgctcgaccgcgccggcgccaacaccgcggcgctgaaa
accgcgatggacacgctgatcaggggcctgccgcaggtcgagggcagcggtcagtcggtg
cagccgggccgtgatctgctcgcgctgctgcaggcggctgaaaaggatgccggcaagcgc
ggcgaccagttcgtcagcagcgagctgttcctgctggcggtggccgacagcaagagcgac
atcggcggcgtggtgcgtggtcacggcctgacgcgcaaggcgctcgaggccgcgatcgac
gcggtgcgcggtggcgccacggtcgacaacgccgaggccgaaggccagcgcgaggcgctc
aagaaatacacgctcgacctgaccgagcgcgcccgcatgggcaagctcgacccggtgatc
ggccgcgacgacgagatccgccgcgccatccaggtgctgcagcgccgcagcaagaacaac
ccggtgctgatcggcgagccgggtgtcggcaagaccgcgatcgtcgagggcctggcgcag
cgcatcgtcaacggcgaggtgcccgagagcctgaagaacaagcgcgtgctggtgctcgac
atggccgggctgctggccggcgccaagtaccgcggcgagttcgaggagcgcctgaaggcg
gtgctcaaggaagtggccgccgacgagggccgcatcatcctgttcatcgacgagctgcac
acgatggtcggcgccggcaaggccgagggcgcgatcgacgccggcaacatgctcaagccc
gcgctggcgcgtggcgagctgcactgcatcggcgcgaccacgctcaacgaataccgcaag
tacgtcgagaaggacgccgcgctggagcggcgtttccagaaggtgctggtcgacgaaccg
agcgtggaggccacggtcgccatcctgcgcggcctgcaggaaaagtacgaggtgcaccac
ggcgtgcagatcaccgacccggccatcatcgccgcggccgagctgagccaccgctacgtc
accgaccgcttcctgcccgacaaggcgatcgacctgatcgacgaggcggcggccaagatc
aagatcgagatggactccaagccggagtcgatggacaagctcgatcgccggctgatccag
ctcaagatcgagcgcgaggcggtgcgcaaggagaaggacgaaggttcggtgcgccgcttc
ggcctgatcgaggaagagatcgccaagctcgaacgcgaagcggccgatctggaggagatc
tggaaggctgaaaaggccgccgcgcagggttccaagcagttcatggaagagatcgagagc
gcgcgcctgcagatcgaggagttcaagcgcaagggcgatttcaaccgcgtggccgagttg
cagtacggcaagctgcccgagctggaaaagaagctgcacgacgcccaggccaaggaggcc
ggcaaggccaagggcggtcagggcccgcaactgctgcgcacggtggtgggcgccgaggag
atcgccgaggtggtgtcgcgtgccaccggcatcccggtggccaagctgatgcagggcgag
cgcgacaagctgctgcagatggaaggcaagctgcacgaccgcgtggtcggccagagcgag
gcgatcatcgcggtgagcaacgcgatccggcgttcacgcgccggcttgagcgacccgaac
cggccgctcggcagcttcctgttcctggggcccaccggcgtcggcaagaccgagctgtgc
aaggcgctggcgggtttcctgttcgacagcgacgaccacatgatccgcatcgacatgagc
gagttcatggagaagcactcggtgagccggctgatcggcgcgcccccgggttacgtcggt
tatgacgaaggcggctacctgaccgaggcggtgcgccgcaagccttacagcgtgctgctg
ctcgacgaggtcgagaaggcgcatccggacgtcttcaacgtgctgctgcaggtgctcgac
gacggccgcctgaccgacgggcagggccgcacggtcgacttcaagaacaccgtgatcgtg
atgaccagcaacctgggctcgcaccagatcatgcagatggccgggcaggacaccgagctg
atccgcgaggcggtgtgggccgaggtcaagcagcatttccgcccggagttcctgaaccgc
atcgacgaggcggtggtgttccatgcgctcgaccagaagcacatcgaggcgatcgcgcag
atccagctgaaggcgctggcggcgcggctgggcaagatggagatgacgctggaggtctcg
cccgaggcgctggccgagctggcgaaggtcggcttcgatccggtgttcggcgcgcggccg
ctcaagcgggcgatccagcagcgcatcgagaacccggtcgccaagctgatcctggagggc
cgcttcggcccgaaggacgtggtgccggtcaacgtcggcgccaccggcgacttcgagttc
ggccgcacggtgcactga
DBGET
integrated database retrieval system
