Leptothrix cholodnii: Lcho_2033
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Entry
Lcho_2033 CDS
T00681
Name
(GenBank) extracellular solute-binding protein family 5
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
lch
Leptothrix cholodnii
Pathway
lch02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
lch00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Lcho_2033
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lch02000
]
Lcho_2033
Transporters [BR:
lch02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Lcho_2033
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
YgaP-like_TM
Motif
Other DBs
NCBI-ProteinID:
ACB34300
UniProt:
B1Y201
LinkDB
All DBs
Position
complement(2207915..2210140)
Genome browser
AA seq
741 aa
AA seq
DB search
MADHAMAWMQRVIRFGAGLVLAGLTLLAGCDNSPHGPGSAASNTLYTAFTERSPRHLDPV
ASYWNQDTPYTYGIYEPPYTYHYLKRPFTLIPKVATEVAPPVYLDKNGRRLAADAPGEQV
AESVYEVRIRPGIRYQPHPAFAQDAQGRYLYHQLSAAQVGERTSPWQFEVTGTRELVAED
FVYGLKRHATTRVTTPIFGIFAEYIVGLKEYGALVKQEDAKLRAGLDPAALDKPFLDFRR
WPLAGVSAPEKHLLRLRIRGKYPQWKYWMAMPFAAPMPWEADAFYAQPGMARNGLSLDRW
PVGTGPFMMAEFEQDRRHVLVRNPNYRGDPYPCEGMPGDRERGLLDDCGKPTPFVDRIVF
QMEREQVPLKAKFRQGFLDVPEIERTDRGADYLIDMEDSPEARAEYTERGYQLPRAGDLS
IWFMGFNMLDPVVGRGDTPEQQARNRRLRQAISIALDWADYSNIFPNKGGVEAMGPLPAG
IFGSRQGALDGVNPVTHRVVDGKIVRRPIEDARKLMVEAGYPDGRDARTGRPLVINYDFY
RTLTPEFKAEIDWMSRQFGQLGIQLEVRATDNNQFQDKVRKGRHQLFFSGWLADYPDAEN
FLFLLYGPNGKTRSEGENTANYDNPAFDRLFQQLKDLDDGPPKQALIDRMVALLQDDAPW
IWGYIPDATGAFQPWVRNAVVPVLIKDHLRFYRVDTALRTRLQRAWNRPVGWPLMLAGVA
LLALVWFGWRSWRARERATAR
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atggccgatcacgcgatggcctggatgcaacgcgtgatccgcttcggcgctggcctggtg
ctggcaggcctcaccttgctggccggctgcgacaacagtccgcacggccctggctcggcg
gcctcgaacacgctctacaccgcgttcaccgagcgctcgccacgacacctcgacccagtg
gcgtcgtactggaaccaggacacgccctacacctacggcatctacgagccgccgtacacc
tatcactacctcaagcgcccgttcacgctgatcccgaaggtggcgaccgaggtggcgccg
ccggtctatctggacaagaacggccggcgcctggccgctgatgcgccgggcgaacaggtg
gccgagagcgtgtacgaggtgcgcatccgccccggcatccgctaccagccgcacccggcg
tttgcgcaggacgcgcaaggccgctacctgtatcaccagctgagcgcggcgcaggtgggc
gagcgcacgtcgccgtggcagttcgaggtgacgggtacgcgcgaactggtggccgaggac
ttcgtctacggcctcaagcgccacgccaccacgcgggtgaccacgccgatcttcggcatc
tttgccgagtacatcgtcgggctgaaggagtacggcgcgctggtcaagcaggaggacgcc
aagctgcgcgccgggctcgatccggccgcactcgacaagccgtttctcgacttccgccgc
tggccactggcgggggtcagcgcgccggagaagcacctgctgcgcctgcgcatccgcggc
aagtatccgcagtggaaatactggatggcgatgccgtttgccgcgccgatgccgtgggag
gccgacgccttctacgcccagccgggcatggcgcgcaacgggctgtcgctggaccgctgg
ccggtcggcaccgggccgttcatgatggccgagttcgaacaggatcgccgccacgtgctg
gtacgcaaccccaactaccgcggcgacccgtacccctgcgaaggcatgcccggcgaccgc
gagcgcggcctgctcgacgactgcggcaagccgacgcccttcgtcgaccggatcgtgttc
cagatggagcgcgaacaggtgccgctgaaagccaagttccgccagggtttcctggacgtg
cccgagatcgagcgcaccgaccgcggcgccgactatctgatcgacatggaagactcgccc
gaagcgcgcgccgagtacaccgagcgcggctaccagctgccgcgcgccggcgacctgagc
atctggttcatgggcttcaacatgctcgacccggtggtcggccgcggcgacacgcccgag
cagcaggcgcgcaatcgccggctgcgccaggcgatctcgatcgcgctcgactgggccgac
tacagcaacatcttcccgaacaagggcggcgtcgaggcgatggggccgctgccggcaggc
atcttcggctcgcgacaaggtgcgctcgacggcgtcaatccggtcacgcaccgggtggtc
gacggcaagatcgtgcggcggccgatcgaggacgcgcgcaagctgatggtcgaggccggc
taccccgacgggcgcgacgcccgcacgggccgcccgctggtcatcaactacgatttctac
cgcacgctgacgcccgaattcaaggccgagatcgattggatgagccgccagttcggccag
ctcggcatccagctcgaggtgcgcgccaccgacaacaaccagttccaggacaaggtgcgc
aagggccggcatcagctgttcttctcgggctggctggccgattacccggacgcggagaac
ttcctgttcctgctctacggcccgaacggcaagacccgctcggagggcgagaacaccgcc
aactacgacaacccggccttcgaccggctgttccagcagctcaaggatctggacgacggg
ccgcccaagcaggcgctgatcgaccgcatggtggcgctgctgcaggacgacgcgccgtgg
atctggggctacatccccgacgccaccggcgccttccagccctgggtgcgcaacgcggtg
gtgccggtgctgatcaaggatcacctgcgtttctaccgcgtcgacacggcgctgcgcacg
cggctgcagcgggcctggaaccggccggtcggctggccgctgatgctcgcgggcgtggcg
ctgctggcgctggtctggttcggctggcgcagctggcgagcgcgtgaacgagcgacggcg
cgatga
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