Leptothrix cholodnii: Lcho_2078
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Entry
Lcho_2078 CDS
T00681
Name
(GenBank) ABC transporter-related protein
KO
K06158
ATP-binding cassette, subfamily F, member 3
Organism
lch
Leptothrix cholodnii
Brite
KEGG Orthology (KO) [BR:
lch00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
lch03012
]
Lcho_2078
Translation factors [BR:
lch03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
Lcho_2078
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
AAA_29
ABC_tran_CTD
MMR_HSR1
RsgA_GTPase
AAA_5
ATP-synt_ab
NACHT
MeaB
Piezo_TM25-28
Motif
Other DBs
NCBI-ProteinID:
ACB34345
UniProt:
B1Y246
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All DBs
Position
2266744..2268708
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AA seq
654 aa
AA seq
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MLQLKNITLRRGTKLVLEQTGFTLQPGEKASLVGRNGAGKSSLFALLTHRLQSDGGEVEM
PPRWRIAEVEQNMPETEQGATDFVLEGDRPLMAARAALAAAEAADDGHAIGDAYLALGEA
GEFDAVARAQTLLLGLGFSMAQVDSPVNSFSGGWRMRLQLARALMFPGELLLLDEPTNHL
DLDALVWLEAWLQRFEGTMLVISHDREFLDAVTKVTLHLEETKLTRYGSNYSGFELMRAE
RMEQQQAAFGKQQEKVAHLQRFIDRFKAKASKAKQAQSRVKALARMEKIAPVLTSADFQF
EFREPQSLPNPMLVMSDLEVGYPGEDGAPDTVIVRNINKSVLPGERIGILGANGQGKSTL
VKTVSRMQKALGGHIQEGKGLAIGYFAQQEMDVLRPDEGPLAHMIRLARDQGPPGREQEL
RDFLGRFRFTGEMVGQAVGSLSGGEKARLVLAMLVWQRPNLLLLDEPTNHLDLTTREALS
MALNEYEGTVMLVSHDRALLREVCDEFWLVTKGRVEPFDGDLDDYQKWLLEQSREAARAA
KASQQSPAAAPVNTVAAAPSAPVDAGDRKASAAIRQKRAELAKPLKKEQAQVEQRLAAAQ
AQHATLLAAMADAALPAARRAEQGRQLKELADSIETLEHRWLEIGEALEDMSRD
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgctccagctcaagaacatcaccctgcgtcgcggcaccaagctcgtgctcgaacaaacc
ggcttcaccctgcagcctggcgaaaaggccagcctggtgggccgcaacggcgcgggcaag
tccagtcttttcgcgctgctgacccaccgtctgcagtccgacggcggcgaggtcgagatg
ccgccgcgctggcgcatcgccgaggtcgagcagaacatgcccgagaccgaacagggcgcc
accgacttcgtgctcgaaggcgaccggccgctgatggccgcgcgtgccgcgctcgctgcc
gccgaagcggccgacgatggccacgccatcggcgacgcctacctggcgctgggcgaggcc
ggcgagttcgacgcggtggcccgcgcgcagacgctgctgctgggcctgggcttctcgatg
gcgcaggtcgactcgcccgtcaacagcttctcgggcggctggcggatgcggctgcagctg
gcgcgtgcgctgatgttcccgggcgaactgctgctgctcgacgaacccaccaaccacctg
gacctcgacgcgctggtctggctcgaagcctggctgcagcgcttcgagggcacgatgctg
gtgatcagccacgaccgcgaattcctcgacgccgtcaccaaggtcacgctgcacctcgag
gagaccaagctgacgcgctacggcagcaactactcgggcttcgaactgatgcgcgccgag
cgcatggagcagcagcaggccgcgttcggcaagcagcaggagaaggtggcacacctgcag
cgcttcatcgaccgcttcaaggccaaggccagcaaggccaagcaggcgcagagccgcgtc
aaggcgctggcacggatggagaagatcgcgccggtgctgacgagcgccgacttccagttc
gagttccgcgagccgcagagcctgccaaacccgatgctggtgatgagcgatctggaggtc
ggctatccgggcgaggacggtgcgcccgacacggtcatcgtgcgcaacatcaacaagagc
gtgctgccgggtgagcgcatcggcatcctgggcgccaacggccagggcaagtcgacgctg
gtcaagacggtgtcgcgcatgcagaaggcgctgggcggccacatccaggagggcaagggc
ctggcgatcggctatttcgcgcagcaggagatggacgtgctgcgccccgacgaaggcccg
ctggcgcacatgatccgcctggcccgcgatcagggcccgccagggcgcgaacaggaactg
cgcgacttcctcggccgcttccgcttcaccggcgagatggtcggacaggcggtcggcagt
ctgtcgggcggcgagaaggcgcggctggtgctggccatgctggtctggcagcgccccaac
ctgctgctgctcgacgagccgaccaaccacctcgacctgaccacccgcgaggcgctgagc
atggcgctcaacgaatacgaaggcacggtgatgctggtcagccacgaccgcgccctgctg
cgcgaggtgtgcgacgagttctggctggtcaccaagggccgcgtcgagcccttcgacggc
gatctggacgactaccagaagtggctgctcgagcagagccgagaagccgcgcgggccgcc
aaggcctcgcagcaaagcccagcggccgcaccggtcaataccgtcgccgccgcgcccagc
gcgccggtcgatgccggcgatcgcaaggccagcgcagccatccgccagaaacgagccgaa
ctggccaagcccctgaagaaggagcaggcgcaggtcgaacaacggctggccgcggcccag
gcccagcacgccacgctgctggccgcgatggccgacgccgccttgccagccgcccggcgc
gccgaacaaggccgtcaactcaaggaactggccgacagcatcgagacgctcgagcaccgc
tggctggagatcggcgaagcactcgaagacatgtcgcgcgactga
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