Leptothrix cholodnii: Lcho_2092
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Entry
Lcho_2092 CDS
T00681
Name
(GenBank) type I secretion system ATPase
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
lch
Leptothrix cholodnii
Pathway
lch02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lch00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Lcho_2092
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lch02000
]
Lcho_2092
02044 Secretion system [BR:
lch02044
]
Lcho_2092
Transporters [BR:
lch02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
Lcho_2092
Secretion system [BR:
lch02044
]
Type I secretion system
Adhesin protein transporter
Lcho_2092
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
AAA_21
Peptidase_C39
SMC_N
ABC_ATPase
Zeta_toxin
PduV-EutP
Motif
Other DBs
NCBI-ProteinID:
ACB34359
UniProt:
B1Y260
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All DBs
Position
2280641..2282863
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AA seq
740 aa
AA seq
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MSDTAASARMGIAAPPASTATPNPAPSDTDRLREDLLYPDPLLDCLLEVCRLHGVSASRA
SLSAGLPLDDGRLSLALVERAAGRAGMYTRLQRVKANQIDMSTLPTILLLRGNDACVLLG
WTKDGDARVLLPETGQGAVVMPRRELVRRYTGVALFVRPHFRFDERTPGVREQRVGHWFW
SVVNSQRGVYRDVLWAAFLINLFALAFPIFTMNVYDRVVPNHAVETLWVLSTGLILVLGA
DLYMRLLRSRFVDEASARIDLQLSATLMERVLGMRLEHRPASVGSFAANLRGYEQVRDFI
AASTVTTLIDLPFALLFMLTMLWISPWLLLPVVIAFVLILLTGWVLQGRLHTLSQSTYQA
SAQRNATLVEALTGIETIKTQAAESVVQSRWERGNQFLASAQVRMRDIANRASYGTSSLV
QIVSLAVIVIGVYLISERSLTMGALIACTTLAARALAPAGQIVGLLMQYQGARTALTALD
AVMAKPVEREGGQNFLHRREMLGEIELRNVSFAYPGRDDAVLEGVSLRIAPGERVAFIGR
VGSGKTTLQKLMLGLYQPTEGAVLIDGIDLRQLDPADVRRNMAYVSQDVTLFYGTLRDNI
TLGLPYADDQAVLAAADTACLSEFVNRHPRGFDLQVGERGDLLSGGQRQAVGIARAVLHN
APVLLLDEPTSAMDFSTEAQITRKVTDFAEGKTVVLVTHRTSMLALVQRVVVIDGGKVVA
DGPRDRILEALQSGRIARAA
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacaccgcagcgtccgcccggatgggcattgccgcaccgcccgccagcaccgcg
acgccgaaccctgcgccgtccgataccgaccgcctgcgcgaagacctgctctaccccgac
ccgctgctcgactgcctgctcgaggtctgccgcctgcacggcgtgagcgcgtcgcgcgcc
tcgctcagcgccggcctgccgctcgacgacggtcgcctgagcctggcgctggtcgagcgt
gcggctggccgtgcgggcatgtacacgcggttgcagcgggtcaaggccaaccagatcgac
atgtcgacgctgccgacgatcctgctgctgcgcggcaacgacgcctgcgtgctgctgggc
tggaccaaggacggcgacgcgcgcgtgctgctgcccgaaaccggccagggcgcggtggtg
atgccgcggcgcgaactggtgcgccgctacaccggcgtggcgctgttcgtgcggccgcat
ttccgcttcgacgaacgcacgccgggcgtgcgcgagcagcgcgtcggccactggttctgg
agcgtcgtcaacagccagcgcggcgtctaccgcgacgtgctgtgggccgccttcctgatc
aacctgttcgcgctggcgttcccgatcttcacgatgaacgtctacgaccgggtggtgccc
aaccatgcggtcgagacgctctgggtgctgtcgaccgggctgatcctggtgctcggcgcc
gacctctacatgcgcctgctgcgcagccgtttcgtcgacgaggccagcgcccgcatcgac
ctgcagctgtcggccacgctgatggagcgcgtgctgggcatgcggctcgaacaccggccg
gcctcggtcggctcgttcgcggccaacctgcgcggctacgagcaggtgcgcgacttcatc
gctgcctccaccgtcaccacgctgatcgacctgccgttcgcgctgctgttcatgctgacg
atgctgtggatctcgccctggctgctgctgccggtggtgatcgccttcgtgctgatcctg
ctgaccggctgggtgctgcaggggcgcctgcacacgctgtcgcagtcgacctaccaggcc
agcgcgcagcgcaacgccacgctggtcgaggccctgaccggcatcgagaccatcaagacc
caggccgctgaaagcgtcgtgcaatcgcgctgggagcgcggcaaccagttcctggccagc
gcgcaggtccgcatgcgcgacatcgccaatcgcgccagctacggcaccagctcgctggtg
cagatcgtgtcgctcgcggtgatcgtgatcggcgtctacctgatcagcgagcggtcgctg
acgatgggcgccttgatcgcctgcaccacgctggccgcacgggcgctggcaccggcgggc
cagatcgtcggtctgctgatgcagtaccagggcgcacgcaccgcgctgaccgcgctcgac
gccgtgatggccaagccggtcgaacgcgagggcgggcagaacttcctgcaccgccgcgag
atgctcggcgagatcgagctgcgcaacgtcagcttcgcctatcccggccgcgatgacgcg
gtgctcgaaggtgtcagcctgcgcatcgcaccgggcgagcgggtggccttcatcggccgc
gtcggctcgggcaagaccaccctgcagaaactcatgctcgggctctaccagccgaccgag
ggcgcggtgctgatcgacggcatcgatctgcgccagctcgacccggccgacgtgcgccgc
aacatggcctacgtgtcgcaggacgtgacgctgttctacggcacgctgcgcgacaacatc
acgctcggcctgccgtatgccgacgaccaggcggtgctcgccgctgccgacaccgcctgc
ctgagcgagttcgtcaaccgccacccgcgcggcttcgacctgcaggtgggcgagcgcggc
gacctgctgtcgggcggccagcgccaggcggtcggcatcgcgcgtgcggtgctgcacaac
gcgccggtgctgctgctcgacgagcccaccagcgcgatggacttctcgaccgaagcgcag
atcacccgcaaggtgaccgacttcgccgagggcaagaccgtcgtcctggtcacgcatcgc
acctcgatgctggccctggtccagcgggtcgtcgtgatcgacggcggcaaggtggtggca
gacggtccgcgtgaccgcatcctggaggccctgcaatcgggccggatcgcgagggcggca
tga
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